15 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LAMTOR1	Uncharacterized protein. (161 aa)
	LAMTOR2	Mitogen-activated protein-binding protein-interacting protein. (125 aa)
	LAMTOR5	Hepatitis B virus X-interacting protein like protein. (91 aa)
	RIC1	Protein RIC1 like protein. (1420 aa)
	LAMTOR4	Uncharacterized protein. (99 aa)
	RGP1	Retrograde Golgi transport protein RGP1 like protein. (391 aa)
	WDR41	WD repeat-containing protein 41. (457 aa)
	L5KJE6_PTEAL	Protein very KIND. (325 aa)
	L5KJN9_PTEAL	Protein very KIND. (1593 aa)
	L5KKL8_PTEAL	Putative sodium-coupled neutral amino acid transporter 9. (412 aa)
	L5KM87_PTEAL	Engulfment and cell motility protein 1. (255 aa)
	L5KP04_PTEAL	Engulfment and cell motility protein 1. (484 aa)
	VSIG10	Ig-like domain-containing protein FLJ20674. (543 aa)
	SMCR8	Smith-Magenis syndrome chromosomal region candidate protein 8 protein. (937 aa)
	PDE3B	Phosphodiesterase. (1099 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L5KJE6_PTEAL	L5KJN9_PTEAL	L5KJE6	L5KJN9	Protein very KIND.	Protein very KIND.	0.593
L5KJN9_PTEAL	L5KJE6_PTEAL	L5KJN9	L5KJE6	Protein very KIND.	Protein very KIND.	0.593
L5KKL8_PTEAL	LAMTOR1	L5KKL8	L5K8G5	Putative sodium-coupled neutral amino acid transporter 9.	Uncharacterized protein.	0.985
L5KKL8_PTEAL	LAMTOR2	L5KKL8	L5JUN2	Putative sodium-coupled neutral amino acid transporter 9.	Mitogen-activated protein-binding protein-interacting protein.	0.994
L5KKL8_PTEAL	LAMTOR4	L5KKL8	L5K861	Putative sodium-coupled neutral amino acid transporter 9.	Uncharacterized protein.	0.541
L5KKL8_PTEAL	LAMTOR5	L5KKL8	L5K555	Putative sodium-coupled neutral amino acid transporter 9.	Hepatitis B virus X-interacting protein like protein.	0.992
L5KM87_PTEAL	L5KP04_PTEAL	L5KM87	L5KP04	Engulfment and cell motility protein 1.	Engulfment and cell motility protein 1.	0.920
L5KP04_PTEAL	L5KM87_PTEAL	L5KP04	L5KM87	Engulfment and cell motility protein 1.	Engulfment and cell motility protein 1.	0.920
LAMTOR1	L5KKL8_PTEAL	L5K8G5	L5KKL8	Uncharacterized protein.	Putative sodium-coupled neutral amino acid transporter 9.	0.985
LAMTOR1	LAMTOR2	L5K8G5	L5JUN2	Uncharacterized protein.	Mitogen-activated protein-binding protein-interacting protein.	0.999
LAMTOR1	LAMTOR4	L5K8G5	L5K861	Uncharacterized protein.	Uncharacterized protein.	0.999
LAMTOR1	LAMTOR5	L5K8G5	L5K555	Uncharacterized protein.	Hepatitis B virus X-interacting protein like protein.	0.999
LAMTOR2	L5KKL8_PTEAL	L5JUN2	L5KKL8	Mitogen-activated protein-binding protein-interacting protein.	Putative sodium-coupled neutral amino acid transporter 9.	0.994
LAMTOR2	LAMTOR1	L5JUN2	L5K8G5	Mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.999
LAMTOR2	LAMTOR4	L5JUN2	L5K861	Mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.999
LAMTOR2	LAMTOR5	L5JUN2	L5K555	Mitogen-activated protein-binding protein-interacting protein.	Hepatitis B virus X-interacting protein like protein.	0.999
LAMTOR4	L5KKL8_PTEAL	L5K861	L5KKL8	Uncharacterized protein.	Putative sodium-coupled neutral amino acid transporter 9.	0.541
LAMTOR4	LAMTOR1	L5K861	L5K8G5	Uncharacterized protein.	Uncharacterized protein.	0.999
LAMTOR4	LAMTOR2	L5K861	L5JUN2	Uncharacterized protein.	Mitogen-activated protein-binding protein-interacting protein.	0.999
LAMTOR4	LAMTOR5	L5K861	L5K555	Uncharacterized protein.	Hepatitis B virus X-interacting protein like protein.	0.998