4 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RRAGA	Ras-related GTP-binding protein A. (291 aa)
	L5JMV1_PTEAL	Ras-related GTP-binding protein D. (420 aa)
	L5JRI2_PTEAL	Ras-related GTP-binding protein C. (401 aa)
	L5KEI2_PTEAL	Ras-related GTP-binding protein B. (368 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L5JMV1_PTEAL	L5JRI2_PTEAL	L5JMV1	L5JRI2	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein C.	0.986
L5JMV1_PTEAL	L5KEI2_PTEAL	L5JMV1	L5KEI2	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein B.	0.846
L5JMV1_PTEAL	RRAGA	L5JMV1	L5K897	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein A.	0.845
L5JRI2_PTEAL	L5JMV1_PTEAL	L5JRI2	L5JMV1	Ras-related GTP-binding protein C.	Ras-related GTP-binding protein D.	0.986
L5JRI2_PTEAL	L5KEI2_PTEAL	L5JRI2	L5KEI2	Ras-related GTP-binding protein C.	Ras-related GTP-binding protein B.	0.846
L5JRI2_PTEAL	RRAGA	L5JRI2	L5K897	Ras-related GTP-binding protein C.	Ras-related GTP-binding protein A.	0.845
L5KEI2_PTEAL	L5JMV1_PTEAL	L5KEI2	L5JMV1	Ras-related GTP-binding protein B.	Ras-related GTP-binding protein D.	0.846
L5KEI2_PTEAL	L5JRI2_PTEAL	L5KEI2	L5JRI2	Ras-related GTP-binding protein B.	Ras-related GTP-binding protein C.	0.846
RRAGA	L5JMV1_PTEAL	L5K897	L5JMV1	Ras-related GTP-binding protein A.	Ras-related GTP-binding protein D.	0.845
RRAGA	L5JRI2_PTEAL	L5K897	L5JRI2	Ras-related GTP-binding protein A.	Ras-related GTP-binding protein C.	0.845