7 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMA7	Proteasome subunit alpha type. (248 aa)
	PSMA1	Proteasome subunit alpha type. (289 aa)
	L5K287_PTEAL	Proteasome subunit alpha type. (250 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMA4	Proteasome subunit alpha type. (287 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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Export your current network:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L5K287_PTEAL	PSMA1	L5K287	L5L4T3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.983
L5K287_PTEAL	PSMA2	L5K287	L5JQS9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
L5K287_PTEAL	PSMA4	L5K287	L5L4K6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
L5K287_PTEAL	PSMA5	L5K287	L5K2D7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.973
L5K287_PTEAL	PSMA6	L5K287	L5KIA6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.981
PSMA1	L5K287_PTEAL	L5L4T3	L5K287	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.983
PSMA1	PSMA2	L5L4T3	L5JQS9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA1	PSMA4	L5L4T3	L5L4K6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA1	PSMA5	L5L4T3	L5K2D7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA1	PSMA6	L5L4T3	L5KIA6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA1	PSMA7	L5L4T3	L5JZA0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
PSMA2	L5K287_PTEAL	L5JQS9	L5K287	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
PSMA2	PSMA1	L5JQS9	L5L4T3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA2	PSMA4	L5JQS9	L5L4K6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA2	PSMA5	L5JQS9	L5K2D7	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA2	PSMA6	L5JQS9	L5KIA6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA2	PSMA7	L5JQS9	L5JZA0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA4	L5K287_PTEAL	L5L4K6	L5K287	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
PSMA4	PSMA1	L5L4K6	L5L4T3	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA4	PSMA2	L5L4K6	L5JQS9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999