81 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KXD1	KxDL domain-containing protein. (176 aa)
	UBC	Ubiquitin. (381 aa)
	L5KTJ3_PTEAL	AP-2 complex subunit beta. (151 aa)
	L5KT82_PTEAL	Vigilin. (124 aa)
	LCAT	Phosphatidylcholine-sterol acyltransferase. (440 aa)
	HDLBP	Vigilin. (1219 aa)
	SCARB1	Scavenger receptor class B member 1; Belongs to the CD36 family. (345 aa)
	L5KRN9_PTEAL	AP-1 complex subunit beta-1. (52 aa)
	L5JMR4_PTEAL	SSD domain-containing protein. (186 aa)
	SMPDL3A	Acid sphingomyelinase-like phosphodiesterase. (453 aa)
	L5JN86_PTEAL	Patched domain-containing protein 1. (219 aa)
	PTCHD4	SSD domain-containing protein. (536 aa)
	NPC2	Epididymal secretory protein E1. (149 aa)
	L5JQN5_PTEAL	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1532 aa)
	L5JQT4_PTEAL	AP complex subunit beta. (1042 aa)
	AP2M1	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (433 aa)
	LIPA	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (399 aa)
	LDLRAP1	Low density lipoprotein receptor adapter protein 1. (264 aa)
	L5KRE2_PTEAL	Apolipoprotein B-100. (4317 aa)
	PTCHD1	Patched domain-containing protein 1. (964 aa)
	AP2A2	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (913 aa)
	L5KPA1_PTEAL	Arylacetamide deacetylase-like 1. (536 aa)
	CLTA	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (218 aa)
	L5KMW3_PTEAL	Apolipoprotein A-IV. (413 aa)
	APOA1	Apolipoprotein A-I. (265 aa)
	APOE	Apolipoprotein E. (331 aa)
	P4HB	Protein disulfide-isomerase. (509 aa)
	APOC3	Apolipoprotein C-III. (100 aa)
	APOBR	Apolipoprotein B-100 receptor. (1119 aa)
	GPIHBP1	Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1. (172 aa)
	APOA5	Apolipoprotein A-V. (369 aa)
	L5KIB7_PTEAL	Arylacetamide deacetylase-like 3. (407 aa)
	L5KI66_PTEAL	Alpha-2-macroglobulin. (1478 aa)
	PHC1	Alpha-2-macroglobulin-like protein 1. (2368 aa)
	LMF1	Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family. (445 aa)
	PDIA2	Protein disulfide-isomerase A2. (525 aa)
	L5KGZ7_PTEAL	Lipase maturation factor 1. (223 aa)
	L5KGK5_PTEAL	Ovostatin like protein 2. (1279 aa)
	ZDHHC8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (765 aa)
	L5KFX2_PTEAL	Pregnancy zone protein. (591 aa)
	A2M	Alpha-2-macroglobulin. (1475 aa)
	PLEKHD1	UPF0639 protein. (529 aa)
	L5KDE2_PTEAL	GTP-binding protein SAR1a. (206 aa)
	ABCG1	ATP-binding cassette sub-family G member 1. (733 aa)
	ANGPTL4	Angiopoietin-related protein 4. (412 aa)
	PRKACA	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily. (346 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily. (336 aa)
	ABCA2	ATP-binding cassette sub-family A member 2. (2683 aa)
	L5K6S8_PTEAL	Proprotein convertase subtilisin/kexin type 5; Belongs to the peptidase S8 family. (1674 aa)
	L5K5Y9_PTEAL	Angiopoietin-related protein 3. (430 aa)
	VLDLR	Very low-density lipoprotein receptor. (874 aa)
	L5K4W2_PTEAL	Microsomal triglyceride transfer protein large subunit. (1066 aa)
	L5JX56_PTEAL	GTP-binding protein SAR1b. (152 aa)
	L5JYU4_PTEAL	Phospholipid transfer protein. (453 aa)
	LIPC	Hepatic triacylglycerol lipase. (410 aa)
	LIPG	Endothelial lipase. (500 aa)
	L5K236_PTEAL	Lipolysis-stimulated lipoprotein receptor. (348 aa)
	NPC1	Niemann-Pick C1 protein. (1297 aa)
	LSR	Lipolysis-stimulated lipoprotein receptor. (336 aa)
	BMP1	Metalloendopeptidase. (934 aa)
	PCSK4	Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family. (727 aa)
	L5L6X9_PTEAL	60S ribosomal protein L40. (74 aa)
	SOAT2	O-acyltransferase. (538 aa)
	L5L6G9_PTEAL	Lipoprotein lipase. (422 aa)
	FURIN	Furin; Belongs to the peptidase S8 family. (703 aa)
	L5L516_PTEAL	Oxysterols receptor LXR-beta. (169 aa)
	AP2A1	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (947 aa)
	L5L4F8_PTEAL	AP-1 complex subunit beta-1. (152 aa)
	NR1H2	Oxysterols receptor LXR-beta. (235 aa)
	LDLR	Low-density lipoprotein receptor. (881 aa)
	L5L3H8_PTEAL	Furin. (146 aa)
	L5L3H5_PTEAL	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (232 aa)
	ABCA1	ATP-binding cassette sub-family A member 1. (2202 aa)
	CUBN	Cubilin. (3499 aa)
	APOA2	Apolipoprotein A-II. (99 aa)
	SNRPA1	Proprotein convertase subtilisin/kexin type 6; Belongs to the peptidase S8 family. (908 aa)
	NR1H3	Oxysterols receptor LXR-alpha. (449 aa)
	APOF	Apolipoprotein F. (403 aa)
	L5KWC8_PTEAL	Ubiquitin. (77 aa)
	L5KUQ6_PTEAL	Clathrin heavy chain linker domain-containing protein 1. (411 aa)
	MYLIP	E3 ubiquitin-protein ligase MYLIP. (452 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA1	APOA1	L5L1M9	L5KMA9	ATP-binding cassette sub-family A member 1.	Apolipoprotein A-I.	0.929
ABCA1	APOA2	L5L1M9	L5L006	ATP-binding cassette sub-family A member 1.	Apolipoprotein A-II.	0.454
ABCA1	APOC3	L5L1M9	L5KKQ2	ATP-binding cassette sub-family A member 1.	Apolipoprotein C-III.	0.400
ABCA1	APOE	L5L1M9	L5KM50	ATP-binding cassette sub-family A member 1.	Apolipoprotein E.	0.620
ABCA1	L5JYU4_PTEAL	L5L1M9	L5JYU4	ATP-binding cassette sub-family A member 1.	Phospholipid transfer protein.	0.446
ABCA1	L5KRE2_PTEAL	L5L1M9	L5KRE2	ATP-binding cassette sub-family A member 1.	Apolipoprotein B-100.	0.503
ABCA1	L5L516_PTEAL	L5L1M9	L5L516	ATP-binding cassette sub-family A member 1.	Oxysterols receptor LXR-beta.	0.783
ABCA1	LCAT	L5L1M9	L5KSS9	ATP-binding cassette sub-family A member 1.	Phosphatidylcholine-sterol acyltransferase.	0.464
ABCA1	LIPC	L5L1M9	L5K133	ATP-binding cassette sub-family A member 1.	Hepatic triacylglycerol lipase.	0.456
ABCA1	NPC1	L5L1M9	L5K297	ATP-binding cassette sub-family A member 1.	Niemann-Pick C1 protein.	0.464
ABCA1	NR1H2	L5L1M9	L5L459	ATP-binding cassette sub-family A member 1.	Oxysterols receptor LXR-beta.	0.783
ABCA1	NR1H3	L5L1M9	L5KX96	ATP-binding cassette sub-family A member 1.	Oxysterols receptor LXR-alpha.	0.672
ABCA1	PRKACA	L5L1M9	L5K8D3	ATP-binding cassette sub-family A member 1.	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.	0.564
ABCA1	PRKACB	L5L1M9	L5K737	ATP-binding cassette sub-family A member 1.	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	0.420
ABCA1	SCARB1	L5L1M9	L5KS71	ATP-binding cassette sub-family A member 1.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.605
ABCA1	ZDHHC8	L5L1M9	L5KGA9	ATP-binding cassette sub-family A member 1.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.641
ABCA2	APOA2	L5K6T9	L5L006	ATP-binding cassette sub-family A member 2.	Apolipoprotein A-II.	0.454
ABCA2	APOC3	L5K6T9	L5KKQ2	ATP-binding cassette sub-family A member 2.	Apolipoprotein C-III.	0.400
ABCA2	APOE	L5K6T9	L5KM50	ATP-binding cassette sub-family A member 2.	Apolipoprotein E.	0.620
ABCA2	L5JYU4_PTEAL	L5K6T9	L5JYU4	ATP-binding cassette sub-family A member 2.	Phospholipid transfer protein.	0.446