16 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L5KBS6_PTEAL	Fibronectin type III domain containing 3c. (1573 aa)
	FUNDC1	FUN14 domain-containing protein 1. (155 aa)
	SRC	Tyrosine-protein kinase. (536 aa)
	L5K0P2_PTEAL	Zinc finger CCHC domain-containing protein 3. (204 aa)
	MAP1LC3A	Microtubule-associated proteins 1A/1B light chain 3A. (121 aa)
	CSNK2A1	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (391 aa)
	L5JNT3_PTEAL	Autophagy protein 5; Involved in autophagic vesicle formation. (216 aa)
	FNDC3B	Fibronectin type III domain-containing protein 3B. (1158 aa)
	ULK1	Serine/threonine-protein kinase ULK1. (1072 aa)
	CSNK2A2	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (343 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	MAP1LC3B	Microtubule-associated proteins 1A/1B light chain 3B. (125 aa)
	ULK2	Serine/threonine-protein kinase ULK2. (1641 aa)
	L5L3C4_PTEAL	FUN14 domain-containing protein 2. (189 aa)
	LY6G5B	Lymphocyte antigen 6 complex locus protein G5b. (195 aa)
	FNDC3A	Fibronectin type-III domain-containing protein 3a. (1198 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSNK2A1	CSNK2A2	L5JYB0	L5KVL2	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.989
CSNK2A1	CSNK2B	L5JYB0	L5L690	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.994
CSNK2A1	FUNDC1	L5JYB0	L5K9N9	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	FUN14 domain-containing protein 1.	0.941
CSNK2A1	L5L3C4_PTEAL	L5JYB0	L5L3C4	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	FUN14 domain-containing protein 2.	0.452
CSNK2A1	LY6G5B	L5JYB0	L5L5D5	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Lymphocyte antigen 6 complex locus protein G5b.	0.869
CSNK2A2	CSNK2A1	L5KVL2	L5JYB0	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.989
CSNK2A2	CSNK2B	L5KVL2	L5L690	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.992
CSNK2A2	FUNDC1	L5KVL2	L5K9N9	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	FUN14 domain-containing protein 1.	0.941
CSNK2A2	L5L3C4_PTEAL	L5KVL2	L5L3C4	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	FUN14 domain-containing protein 2.	0.432
CSNK2A2	LY6G5B	L5KVL2	L5L5D5	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	Lymphocyte antigen 6 complex locus protein G5b.	0.869
CSNK2B	CSNK2A1	L5L690	L5JYB0	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.994
CSNK2B	CSNK2A2	L5L690	L5KVL2	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.992
CSNK2B	FUNDC1	L5L690	L5K9N9	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	FUN14 domain-containing protein 1.	0.937
CSNK2B	LY6G5B	L5L690	L5L5D5	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Lymphocyte antigen 6 complex locus protein G5b.	0.708
FUNDC1	CSNK2A1	L5K9N9	L5JYB0	FUN14 domain-containing protein 1.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.941
FUNDC1	CSNK2A2	L5K9N9	L5KVL2	FUN14 domain-containing protein 1.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.941
FUNDC1	CSNK2B	L5K9N9	L5L690	FUN14 domain-containing protein 1.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.937
FUNDC1	L5JNT3_PTEAL	L5K9N9	L5JNT3	FUN14 domain-containing protein 1.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.678
FUNDC1	LY6G5B	L5K9N9	L5L5D5	FUN14 domain-containing protein 1.	Lymphocyte antigen 6 complex locus protein G5b.	0.404
FUNDC1	MAP1LC3A	L5K9N9	L5JYG9	FUN14 domain-containing protein 1.	Microtubule-associated proteins 1A/1B light chain 3A.	0.949