STRINGSTRING
ctaB ctaB CFR80_00965 CFR80_00965 metK metK ribH ribH CFR80_03945 CFR80_03945 hpnC hpnC hpnD hpnD CFR80_10340 CFR80_10340 CFR80_10335 CFR80_10335 CFR80_10210 CFR80_10210 aroA aroA cobO cobO CFR80_05500 CFR80_05500 CFR80_02310 CFR80_02310 thiE thiE CFR80_05660 CFR80_05660 miaA miaA CFR80_00810 CFR80_00810 CFR80_11665 CFR80_11665 folP folP nadA nadA murA murA cysK cysK CFR80_06605 CFR80_06605 CFR80_06055 CFR80_06055 kdsA kdsA speE speE hemC hemC uppS uppS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctaBUnannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (319 aa)
CFR80_00965Unannotated protein. (284 aa)
metKUnannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (395 aa)
ribHUnannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (161 aa)
CFR80_03945Unannotated protein. (205 aa)
hpnCUnannotated protein. (280 aa)
hpnDUnannotated protein. (293 aa)
CFR80_10340Unannotated protein. (161 aa)
CFR80_10335Unannotated protein. (157 aa)
CFR80_10210Unannotated protein. (177 aa)
aroAUnannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (450 aa)
cobOUnannotated protein; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (202 aa)
CFR80_05500Unannotated protein. (132 aa)
CFR80_02310Unannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family. (95 aa)
thiEUnannotated protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (211 aa)
CFR80_05660Unannotated protein. (340 aa)
miaAUnannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (334 aa)
CFR80_00810Unannotated protein. (467 aa)
CFR80_11665Unannotated protein. (135 aa)
folPUnannotated protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (345 aa)
nadAUnannotated protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (326 aa)
murAUnannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (420 aa)
cysKUnannotated protein. (329 aa)
CFR80_06605Unannotated protein. (206 aa)
CFR80_06055Unannotated protein; Belongs to the GST superfamily. (203 aa)
kdsAUnannotated protein; Belongs to the KdsA family. (282 aa)
speEUnannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (286 aa)
hemCUnannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (360 aa)
uppSUnannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (215 aa)
Your Current Organism:
Komagataeibacter oboediens
NCBI taxonomy Id: 940286
Other names: Gluconacetobacter oboediens 174Bp2, K. oboediens 174Bp2, Komagataeibacter oboediens 174Bp2, Komagataeibacter oboediens str. 174Bp2, Komagataeibacter oboediens strain 174Bp2
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