STRINGSTRING
murE murE GCA_000227565_00700 GCA_000227565_00700 CFR80_10750 CFR80_10750 CFR80_11490 CFR80_11490 CFR80_11485 CFR80_11485 GCA_000227565_01202 GCA_000227565_01202 CFR80_13670 CFR80_13670 CFR80_09095 CFR80_09095 argD argD asd asd CFR80_07475 CFR80_07475 lysA lysA CFR80_06300 CFR80_06300 dapF dapF dapE dapE dapD dapD dapB dapB dapA dapA CFR80_04940 CFR80_04940 murF murF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murEUnannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (489 aa)
GCA_000227565_00700Unannotated protein. (334 aa)
CFR80_10750Unannotated protein. (481 aa)
CFR80_11490Unannotated protein. (413 aa)
CFR80_11485Unannotated protein. (445 aa)
GCA_000227565_01202Unannotated protein. (472 aa)
CFR80_13670Unannotated protein. (467 aa)
CFR80_09095Unannotated protein. (309 aa)
argDUnannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (401 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (339 aa)
CFR80_07475Unannotated protein. (571 aa)
lysAUnannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (456 aa)
CFR80_06300Unannotated protein. (263 aa)
dapFUnannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (273 aa)
dapEUnannotated protein; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (390 aa)
dapDUnannotated protein; Belongs to the transferase hexapeptide repeat family. (282 aa)
dapBUnannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (263 aa)
dapAUnannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa)
CFR80_04940Unannotated protein; Belongs to the aspartokinase family. (417 aa)
murFUnannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (463 aa)
Your Current Organism:
Komagataeibacter oboediens
NCBI taxonomy Id: 940286
Other names: Gluconacetobacter oboediens 174Bp2, K. oboediens 174Bp2, Komagataeibacter oboediens 174Bp2, Komagataeibacter oboediens str. 174Bp2, Komagataeibacter oboediens strain 174Bp2
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