STRINGSTRING
ABK49302.1 ABK49302.1 uppP uppP ABK49838.1 ABK49838.1 ABK49938.1 ABK49938.1 ABK49939.1 ABK49939.1 ABK49940.1 ABK49940.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABK49302.1KEGG: son:SO1294 ribosomal RNA large subunit methyltransferase A, putative. (279 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (266 aa)
ABK49838.1PFAM: protein of unknown function DUF81; KEGG: son:SO4058 hypothetical protein. (247 aa)
ABK49938.1TIGRFAM: conserved hypothetical protein; KEGG: son:SO4194 hypothetical protein. (346 aa)
ABK49939.1PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4195 PAP2 family protein. (170 aa)
ABK49940.1Uroporphyrinogen decarboxylase; KEGG: son:SO4196 hypothetical protein. (84 aa)
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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