STRINGSTRING
ABK47944.1 ABK47944.1 ABK46309.1 ABK46309.1 ABK46342.1 ABK46342.1 ABK46376.1 ABK46376.1 tuf1 tuf1 secE secE rpoB rpoB rpoC rpoC ABK46441.1 ABK46441.1 secY secY rpoA rpoA ABK46534.1 ABK46534.1 katG1 katG1 ABK46652.1 ABK46652.1 ABK46691.1 ABK46691.1 ABK46694.1 ABK46694.1 ABK46695.1 ABK46695.1 ABK46732.1 ABK46732.1 ABK46748.1 ABK46748.1 ABK46763.1 ABK46763.1 ABK46775.1 ABK46775.1 ABK46918.1 ABK46918.1 ABK46937.1 ABK46937.1 ABK46971.1 ABK46971.1 ABK46972.1 ABK46972.1 ABK47021.1 ABK47021.1 ABK47036.1 ABK47036.1 ABK47140.1 ABK47140.1 ABK47181.1 ABK47181.1 ABK47182.1 ABK47182.1 ABK47200.1 ABK47200.1 secD secD secF secF ABK47262.1 ABK47262.1 ABK47317.1 ABK47317.1 ABK47331.1 ABK47331.1 ABK47440.1 ABK47440.1 ABK47504.1 ABK47504.1 ABK47511.1 ABK47511.1 ABK47653.1 ABK47653.1 secD-2 secD-2 secF-2 secF-2 ABK47721.1 ABK47721.1 ABK47872.1 ABK47872.1 ABK47887.1 ABK47887.1 ABK47925.1 ABK47925.1 ABK46287.1 ABK46287.1 ABK48014.1 ABK48014.1 ABK48070.1 ABK48070.1 ABK48628.1 ABK48628.1 ABK48160.1 ABK48160.1 ABK48220.1 ABK48220.1 ABK48277.1 ABK48277.1 ABK48279.1 ABK48279.1 ABK48292.1 ABK48292.1 ABK48355.1 ABK48355.1 ABK48359.1 ABK48359.1 msrA msrA ABK48412.1 ABK48412.1 ABK48433.1 ABK48433.1 ABK48453.1 ABK48453.1 ABK48497.1 ABK48497.1 ndk ndk ABK48555.1 ABK48555.1 ABK48558.1 ABK48558.1 ABK48563.1 ABK48563.1 ABK50177.1 ABK50177.1 ABK50091.1 ABK50091.1 rpoZ rpoZ secA secA ABK49819.1 ABK49819.1 ABK49813.1 ABK49813.1 mdtL mdtL ABK49805.1 ABK49805.1 katG2 katG2 ABK49769.1 ABK49769.1 ABK49651.1 ABK49651.1 ABK49549.1 ABK49549.1 ABK49456.1 ABK49456.1 ABK49314.1 ABK49314.1 ABK49216.1 ABK49216.1 ABK49208.1 ABK49208.1 ABK49107.1 ABK49107.1 ABK49104.1 ABK49104.1 ABK48877.1 ABK48877.1 ABK48855.1 ABK48855.1 msbA msbA ABK48768.1 ABK48768.1 ABK48764.1 ABK48764.1 ABK48755.1 ABK48755.1 ABK48671.1 ABK48671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABK47944.12-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (397 aa)
ABK46309.1PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1597 multidrug transporter, putative. (482 aa)
ABK46342.1PFAM: Siderophore-interacting protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rba:RB11489 vulnibactin utilization protein VIUB. (248 aa)
ABK46376.1Ferritin, Dps family protein; Iron-storage protein. (178 aa)
tuf1Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (394 aa)
secEProtein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (123 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1345 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1405 aa)
ABK46441.1TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu domain protein domain protein; elongation factor Tu, domain 2 protein; KEGG: son:SO0217 translation elongation factor Tu. (394 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (446 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa)
ABK46534.1KEGG: hch:HCH_03340 predicted Zn-dependent hydrolase of the beta-lactamase fold. (372 aa)
katG1Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (728 aa)
ABK46652.1TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0406 thioredoxin 1; Belongs to the thioredoxin family. (108 aa)
ABK46691.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0450 major facilitator family protein. (390 aa)
ABK46694.1TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0452 thioredoxin 2; Belongs to the thioredoxin family. (140 aa)
ABK46695.1PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0453 peptidyl-prolyl cis-trans isomerase FkbP. (111 aa)
ABK46732.1PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0481 peptidyl-prolyl cis-trans isomerase, FKBP-type. (259 aa)
ABK46748.1PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4870 MFS permease. (405 aa)
ABK46763.1TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0525 drug resistance transporter, EmrB/QacA family protein. (535 aa)
ABK46775.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0539 transporter, putative. (422 aa)
ABK46918.1PFAM: Mammalian cell entry related domain protein; KEGG: son:SO3952 mce-related protein. (157 aa)
ABK46937.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3933 hypothetical protein. (474 aa)
ABK46971.1PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative. (359 aa)
ABK46972.1PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative. (354 aa)
ABK47021.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3814 AmpG protein, putative. (463 aa)
ABK47036.1PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO3799 regulatory protein AsnC. (164 aa)
ABK47140.1Peptidylprolyl isomerase, FKBP-type; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1065 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. (256 aa)
ABK47181.1Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (157 aa)
ABK47182.1Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (155 aa)
ABK47200.1Peptidylprolyl isomerase, FKBP-type; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1139 peptidyl-prolyl cis-trans isomerase FklB. (205 aa)
secDProtein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (624 aa)
secFProtein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (294 aa)
ABK47262.1Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (110 aa)
ABK47317.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3485 drug resistance transporter, Bcr/CflA family protein. (392 aa)
ABK47331.1Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (381 aa)
ABK47440.1Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (197 aa)
ABK47504.1PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1808 probable transporter. (494 aa)
ABK47511.1PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV0700 probable multidrug/chloramphenicol efflux transporter. (407 aa)
ABK47653.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative. (609 aa)
secD-2Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (616 aa)
secF-2Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (315 aa)
ABK47721.1PFAM: porin, Gram-negative type; KEGG: son:SO3060 outer membrane porin, putative. (389 aa)
ABK47872.1Manganese and iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (194 aa)
ABK47887.1Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; Redoxin domain protein; KEGG: son:SO1877 bacterioferritin comigratory protein. (155 aa)
ABK47925.1Xaa-His dipeptidase; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO1917 multidrug resistance protein, putative. (436 aa)
ABK46287.1PFAM: globin; KEGG: son:SO0039 hypothetical globin. (145 aa)
ABK48014.1PFAM: protein of unknown function DUF1302; KEGG: son:SO2597 hypothetical protein. (680 aa)
ABK48070.1PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO2054 alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (379 aa)
ABK48628.1PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: son:SO2208 phosphotyrosine protein phosphatase. (171 aa)
ABK48160.1Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (149 aa)
ABK48220.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2389 multidrug resistance protein D. (414 aa)
ABK48277.1TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2303 thioredoxin reductase. (317 aa)
ABK48279.1PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO2305 leucine-responsive regulatory protein. (168 aa)
ABK48292.1TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2373 drug resistance transporter, Bcr/CflA family protein. (423 aa)
ABK48355.1Superoxide dismutase, copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (170 aa)
ABK48359.1PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: son:SO2341 alpha keto acid dehydrogenase complex, E2 component. (531 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (159 aa)
ABK48412.1Hypothetical protein. (923 aa)
ABK48433.1TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00744 putative transport protein transmembrane. (402 aa)
ABK48453.1TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr8233 efflux pump protein FarB. (526 aa)
ABK48497.1TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2280 bicyclomycin resistance protein. (407 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (143 aa)
ABK48555.1KEGG: pst:PSPTO1858 hypothetical protein. (309 aa)
ABK48558.1PFAM: major facilitator superfamily MFS_1; KEGG: vvu:VV11143 permease of the major facilitator superfamily. (412 aa)
ABK48563.1PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: son:SO0533 arsenate reductase, putative. (168 aa)
ABK50177.1PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO4567 transcriptional regulator, AsnC family. (158 aa)
ABK50091.1PFAM: porin, Gram-negative type; KEGG: son:SO0312 outer membrane porin, putative. (384 aa)
rpoZDNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (92 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (908 aa)
ABK49819.1PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A1849 major facilitator superfamily MFS_1. (398 aa)
ABK49813.1PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4029 transporter, putative. (455 aa)
mdtLPFAM: major facilitator superfamily MFS_1; KEGG: son:SO4021 transporter, putative. (396 aa)
ABK49805.1PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: son:SO4016 hypothetical protein. (453 aa)
katG2Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (739 aa)
ABK49769.1KEGG: son:SO0732 hypothetical protein. (117 aa)
ABK49651.1KEGG: son:SO0850 hypothetical protein. (541 aa)
ABK49549.1Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (189 aa)
ABK49456.1KEGG: son:SO3665 ABC transporter, ATP-binding/permease protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase. (618 aa)
ABK49314.1PFAM: luciferase family protein; KEGG: pha:PSHAb0540 putative alkanal monooxygenase (FMN-linked). (349 aa)
ABK49216.1Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; Redoxin domain protein; KEGG: son:SO1381 hypothetical protein. (215 aa)
ABK49208.1PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type. (156 aa)
ABK49107.1PFAM: porin, Gram-negative type; KEGG: son:SO1557 outer membrane porin, putative. (314 aa)
ABK49104.1TIGRFAM: phosphate binding protein; KEGG: son:SO1560 phosphate-binding protein. (323 aa)
ABK48877.1Acetate kinase; PFAM: extracellular solute-binding protein, family 5; KEGG: son:SO1805 peptide ABC transporter, periplasmic peptide-binding protein. (541 aa)
ABK48855.1PFAM: porin, Gram-negative type; KEGG: son:SO1821 outer membrane porin, putative. (402 aa)
msbALipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (600 aa)
ABK48768.1PFAM: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; Redoxin domain protein; KEGG: cps:CPS_3474 antioxidant, AhpC/Tsa family. (201 aa)
ABK48764.1PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2548 FAD dependent oxidoreductase. (299 aa)
ABK48755.1KEGG: pha:PSHAa0696 hypothetical protein. (387 aa)
ABK48671.1PFAM: Thioredoxin domain; KEGG: son:SO2017 putative thioredoxin-like protein. (287 aa)
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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