STRINGSTRING
APICC_00005 APICC_00005 APICC_06329 APICC_06329 APICC_04159 APICC_04159 APICC_00885 APICC_00885 APICC_10143 APICC_10143 APICC_06731 APICC_06731 APICC_00322 APICC_00322 APICC_03698 APICC_03698 APICC_03639 APICC_03639 APICC_03303 APICC_03303 APICC_03373 APICC_03373 APICC_03335 APICC_03335 APICC_02906 APICC_02906 APICC_02652 APICC_02652 APICC_05955 APICC_05955 APICC_02302 APICC_02302 APICC_03967 APICC_03967 APICC_09503 APICC_09503 APICC_04198 APICC_04198 APICC_10135 APICC_10135 APICC_05332 APICC_05332 APICC_05188 APICC_05188 APICC_00916 APICC_00916 APICC_05435 APICC_05435 APICC_08787 APICC_08787 APICC_04964 APICC_04964 APICC_02339 APICC_02339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APICC_00005General transcription factor IIH subunit. (562 aa)
APICC_06329Acidic repeat-containing protein. (939 aa)
APICC_04159DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
APICC_00885General transcription factor IIH subunit. (292 aa)
APICC_10143General transcription factor IIH subunit. (73 aa)
APICC_06731TATA box-binding protein. (302 aa)
APICC_00322DNA-directed RNA polymerase I subunit RPA43. (701 aa)
APICC_03698DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1122 aa)
APICC_03639General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
APICC_03303DNA-directed RNA polymerases I and III subunit RPAC1. (355 aa)
APICC_03373DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
APICC_03335DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
APICC_02906DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1708 aa)
APICC_02652TATA-box-binding protein. (256 aa)
APICC_05955Cyclin-H; Belongs to the cyclin family. (355 aa)
APICC_02302DNA excision repair protein ERCC-6. (1125 aa)
APICC_03967Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
APICC_09503Histone H2B; Belongs to the histone H2B family. (380 aa)
APICC_04198CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (320 aa)
APICC_10135Cyclin-dependent kinase 7-like protein; Belongs to the protein kinase superfamily. (338 aa)
APICC_05332DNA excision repair protein haywire. (795 aa)
APICC_05188RNA polymerase I-specific transcription initiation factor RRN3. (571 aa)
APICC_00916TATA-box-binding protein. (321 aa)
APICC_05435DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
APICC_08787DNA-directed RNA polymerases I, II, and III subunit RPABC3. (94 aa)
APICC_04964General transcription factor IIH subunit. (405 aa)
APICC_02339TFIIH basal transcription factor complex helicase subunit. (759 aa)
Your Current Organism:
Apis cerana
NCBI taxonomy Id: 94128
Other names: A. cerana cerana, Apis cerana cerana
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