(11 nodes) Troponin complex network (Mola mola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMMOP00000010112	Uncharacterized protein. (151 aa)
	ENSMMOP00000011759	Troponin I type 1a (skeletal, slow). (180 aa)
	ENSMMOP00000014273	Uncharacterized protein. (238 aa)
	ENSMMOP00000017142	Troponin T type 2b (cardiac). (243 aa)
	ENSMMOP00000017144	Troponin I type 1b (skeletal, slow). (248 aa)
	ENSMMOP00000017915	Troponin C type 2 (fast). (180 aa)
	ENSMMOP00000019271	Uncharacterized protein. (217 aa)
	TNNC1	Troponin C type 1a (slow). (171 aa)
	ENSMMOP00000023047	Troponin C type 1b (slow). (159 aa)
	ENSMMOP00000024682	Troponin T type 3a (skeletal, fast). (266 aa)
	ENSMMOP00000024698	Uncharacterized protein. (171 aa)

Your Current Organism:

Mola mola

NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMMOP00000010112	ENSMMOP00000011759	ENSMMOP00000010112	ENSMMOP00000011759	Uncharacterized protein.	Troponin I type 1a (skeletal, slow).	0.671
ENSMMOP00000010112	ENSMMOP00000014273	ENSMMOP00000010112	ENSMMOP00000014273	Uncharacterized protein.	Uncharacterized protein.	0.764
ENSMMOP00000010112	ENSMMOP00000017142	ENSMMOP00000010112	ENSMMOP00000017142	Uncharacterized protein.	Troponin T type 2b (cardiac).	0.901
ENSMMOP00000010112	ENSMMOP00000017144	ENSMMOP00000010112	ENSMMOP00000017144	Uncharacterized protein.	Troponin I type 1b (skeletal, slow).	0.670
ENSMMOP00000010112	ENSMMOP00000017915	ENSMMOP00000010112	ENSMMOP00000017915	Uncharacterized protein.	Troponin C type 2 (fast).	0.989
ENSMMOP00000010112	ENSMMOP00000019271	ENSMMOP00000010112	ENSMMOP00000019271	Uncharacterized protein.	Uncharacterized protein.	0.913
ENSMMOP00000010112	ENSMMOP00000023047	ENSMMOP00000010112	ENSMMOP00000023047	Uncharacterized protein.	Troponin C type 1b (slow).	0.864
ENSMMOP00000010112	ENSMMOP00000024682	ENSMMOP00000010112	ENSMMOP00000024682	Uncharacterized protein.	Troponin T type 3a (skeletal, fast).	0.957
ENSMMOP00000010112	ENSMMOP00000024698	ENSMMOP00000010112	ENSMMOP00000024698	Uncharacterized protein.	Uncharacterized protein.	0.447
ENSMMOP00000010112	TNNC1	ENSMMOP00000010112	ENSMMOP00000022673	Uncharacterized protein.	Troponin C type 1a (slow).	0.864
ENSMMOP00000011759	ENSMMOP00000010112	ENSMMOP00000011759	ENSMMOP00000010112	Troponin I type 1a (skeletal, slow).	Uncharacterized protein.	0.671
ENSMMOP00000011759	ENSMMOP00000014273	ENSMMOP00000011759	ENSMMOP00000014273	Troponin I type 1a (skeletal, slow).	Uncharacterized protein.	0.788
ENSMMOP00000011759	ENSMMOP00000017142	ENSMMOP00000011759	ENSMMOP00000017142	Troponin I type 1a (skeletal, slow).	Troponin T type 2b (cardiac).	0.921
ENSMMOP00000011759	ENSMMOP00000017915	ENSMMOP00000011759	ENSMMOP00000017915	Troponin I type 1a (skeletal, slow).	Troponin C type 2 (fast).	0.952
ENSMMOP00000011759	ENSMMOP00000019271	ENSMMOP00000011759	ENSMMOP00000019271	Troponin I type 1a (skeletal, slow).	Uncharacterized protein.	0.932
ENSMMOP00000011759	ENSMMOP00000023047	ENSMMOP00000011759	ENSMMOP00000023047	Troponin I type 1a (skeletal, slow).	Troponin C type 1b (slow).	0.979
ENSMMOP00000011759	ENSMMOP00000024682	ENSMMOP00000011759	ENSMMOP00000024682	Troponin I type 1a (skeletal, slow).	Troponin T type 3a (skeletal, fast).	0.961
ENSMMOP00000011759	ENSMMOP00000024698	ENSMMOP00000011759	ENSMMOP00000024698	Troponin I type 1a (skeletal, slow).	Uncharacterized protein.	0.677
ENSMMOP00000011759	TNNC1	ENSMMOP00000011759	ENSMMOP00000022673	Troponin I type 1a (skeletal, slow).	Troponin C type 1a (slow).	0.979
ENSMMOP00000014273	ENSMMOP00000010112	ENSMMOP00000014273	ENSMMOP00000010112	Uncharacterized protein.	Uncharacterized protein.	0.764