(26 nodes) Sarcomere organization network (Mola mola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WDR1	WD repeat domain 1. (583 aa)
	ENSMMOP00000009386	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (192 aa)
	ENSMMOP00000009080	Troponin T2c, cardiac. (233 aa)
	ENSMMOP00000008909	Myozenin 2b. (248 aa)
	ENSMMOP00000005706	Kelch-like family member 41b. (609 aa)
	ENSMMOP00000002596	Kelch-like family member 41a. (598 aa)
	TNNT1	Troponin T1, slow skeletal type. (296 aa)
	ENSMMOP00000009642	Uncharacterized protein. (319 aa)
	ENSMMOP00000009896	Uncharacterized protein. (230 aa)
	ENSMMOP00000009986	PDZ domain-containing protein. (118 aa)
	ENSMMOP00000010030	Leucine rich repeat containing 39. (336 aa)
	SRF	Serum response factor. (540 aa)
	ENSMMOP00000011454	ORAI calcium release-activated calcium modulator 1b. (224 aa)
	ENSMMOP00000012220	PDZ and LIM domain 5b. (595 aa)
	ENSMMOP00000012574	Troponin T type 2a (cardiac). (284 aa)
	ENSMMOP00000012675	Troponin T type 1 (skeletal, slow). (252 aa)
	ENSMMOP00000013021	Cysteine and glycine-rich protein 2. (193 aa)
	ENSMMOP00000015701	Uncharacterized protein. (64 aa)
	MYOZ2	Myozenin 2. (190 aa)
	ENSMMOP00000017142	Troponin T type 2b (cardiac). (243 aa)
	ENSMMOP00000017146	Cysteine and glycine-rich protein 1b. (189 aa)
	ENSMMOP00000017803	Synaptopodin 2-like b. (891 aa)
	ENSMMOP00000019271	Uncharacterized protein. (217 aa)
	SRF-2	Serum response factor. (488 aa)
	ENSMMOP00000024682	Troponin T type 3a (skeletal, fast). (266 aa)
	ENSMMOP00000027472	Titin-cap (telethonin). (179 aa)

Your Current Organism:

Mola mola

NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMMOP00000008909	ENSMMOP00000009386	ENSMMOP00000008909	ENSMMOP00000009386	Myozenin 2b.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.828
ENSMMOP00000008909	ENSMMOP00000027472	ENSMMOP00000008909	ENSMMOP00000027472	Myozenin 2b.	Titin-cap (telethonin).	0.490
ENSMMOP00000009080	ENSMMOP00000009642	ENSMMOP00000009080	ENSMMOP00000009642	Troponin T2c, cardiac.	Uncharacterized protein.	0.525
ENSMMOP00000009080	ENSMMOP00000012574	ENSMMOP00000009080	ENSMMOP00000012574	Troponin T2c, cardiac.	Troponin T type 2a (cardiac).	0.898
ENSMMOP00000009080	ENSMMOP00000017142	ENSMMOP00000009080	ENSMMOP00000017142	Troponin T2c, cardiac.	Troponin T type 2b (cardiac).	0.898
ENSMMOP00000009080	ENSMMOP00000019271	ENSMMOP00000009080	ENSMMOP00000019271	Troponin T2c, cardiac.	Uncharacterized protein.	0.854
ENSMMOP00000009386	ENSMMOP00000008909	ENSMMOP00000009386	ENSMMOP00000008909	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Myozenin 2b.	0.828
ENSMMOP00000009386	ENSMMOP00000009642	ENSMMOP00000009386	ENSMMOP00000009642	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Uncharacterized protein.	0.412
ENSMMOP00000009386	ENSMMOP00000009986	ENSMMOP00000009386	ENSMMOP00000009986	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	PDZ domain-containing protein.	0.434
ENSMMOP00000009386	ENSMMOP00000012220	ENSMMOP00000009386	ENSMMOP00000012220	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	PDZ and LIM domain 5b.	0.434
ENSMMOP00000009386	ENSMMOP00000012574	ENSMMOP00000009386	ENSMMOP00000012574	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Troponin T type 2a (cardiac).	0.416
ENSMMOP00000009386	ENSMMOP00000015701	ENSMMOP00000009386	ENSMMOP00000015701	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Uncharacterized protein.	0.828
ENSMMOP00000009386	ENSMMOP00000017142	ENSMMOP00000009386	ENSMMOP00000017142	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Troponin T type 2b (cardiac).	0.416
ENSMMOP00000009386	ENSMMOP00000027472	ENSMMOP00000009386	ENSMMOP00000027472	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Titin-cap (telethonin).	0.665
ENSMMOP00000009386	MYOZ2	ENSMMOP00000009386	ENSMMOP00000015703	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Myozenin 2.	0.828
ENSMMOP00000009642	ENSMMOP00000009080	ENSMMOP00000009642	ENSMMOP00000009080	Uncharacterized protein.	Troponin T2c, cardiac.	0.525
ENSMMOP00000009642	ENSMMOP00000009386	ENSMMOP00000009642	ENSMMOP00000009386	Uncharacterized protein.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.412
ENSMMOP00000009642	ENSMMOP00000009896	ENSMMOP00000009642	ENSMMOP00000009896	Uncharacterized protein.	Uncharacterized protein.	0.525
ENSMMOP00000009642	ENSMMOP00000012574	ENSMMOP00000009642	ENSMMOP00000012574	Uncharacterized protein.	Troponin T type 2a (cardiac).	0.525
ENSMMOP00000009642	ENSMMOP00000012675	ENSMMOP00000009642	ENSMMOP00000012675	Uncharacterized protein.	Troponin T type 1 (skeletal, slow).	0.525