STRINGSTRING
GCA_000826655_00307 GCA_000826655_00307 GCA_000826655_01113 GCA_000826655_01113 GCA_000826655_01333 GCA_000826655_01333 GCA_000826655_01334 GCA_000826655_01334 GCA_000826655_02123 GCA_000826655_02123
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000826655_00307Unannotated protein. (211 aa)
GCA_000826655_01113Unannotated protein. (272 aa)
GCA_000826655_01333Unannotated protein. (222 aa)
GCA_000826655_01334Unannotated protein. (665 aa)
GCA_000826655_02123Unannotated protein. (209 aa)
Your Current Organism:
Psychroserpens damuponensis
NCBI taxonomy Id: 943936
Other names: JCM 17632, KCTC 23539, P. damuponensis, Psychroserpens damuponensis Lee et al. 2013, Psychroserpens sp. F051-1, strain F051-1
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