STRINGSTRING
PTSG_00137 PTSG_00137 PTSG_00556 PTSG_00556 PTSG_02380 PTSG_02380 PTSG_05439 PTSG_05439 PTSG_05440 PTSG_05440 PTSG_05957 PTSG_05957 PTSG_07737 PTSG_07737 PTSG_09580 PTSG_09580 PTSG_12879 PTSG_12879 PTSG_10029 PTSG_10029 PTSG_10786 PTSG_10786 PTSG_10148 PTSG_10148 PTSG_10299 PTSG_10299
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00137Fe2OG dioxygenase domain-containing protein. (315 aa)
PTSG_00556Uncharacterized protein; Belongs to the DapA family. (312 aa)
PTSG_02380Uncharacterized protein. (482 aa)
PTSG_05439Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (172 aa)
PTSG_054402-Hacid_dh_C domain-containing protein. (74 aa)
PTSG_05957Uncharacterized protein. (300 aa)
PTSG_07737Hyperpolarization-activated ion channel protein. (849 aa)
PTSG_09580D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
PTSG_128792-Hacid_dh_C domain-containing protein. (92 aa)
PTSG_10029Aldehyde reductase. (328 aa)
PTSG_107862,5-didehydrogluconate reductase. (306 aa)
PTSG_10148Aldo/keto reductase. (382 aa)
PTSG_10299Voltage-gated potassium channel subunit beta-1. (357 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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