STRINGSTRING
PTSG_00874 PTSG_00874 PTSG_01213 PTSG_01213 PTSG_04558 PTSG_04558 PTSG_12254 PTSG_12254 PTSG_06657 PTSG_06657 PTSG_07427 PTSG_07427 PTSG_08306 PTSG_08306 PTSG_09366 PTSG_09366 PTSG_09431 PTSG_09431 PTSG_09211 PTSG_09211
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00874Cytochrome b2. (1056 aa)
PTSG_01213Quemao protein; Belongs to the FPP/GGPP synthase family. (328 aa)
PTSG_04558Uncharacterized protein. (586 aa)
PTSG_12254Isopentenyl-diphosphate Delta-isomerase. (202 aa)
PTSG_06657Uncharacterized protein. (260 aa)
PTSG_07427Uncharacterized protein. (164 aa)
PTSG_08306Alkyl transferase; Belongs to the UPP synthase family. (331 aa)
PTSG_09366Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (400 aa)
PTSG_09431Mevalonate kinase. (382 aa)
PTSG_09211Phosphomevalonate kinase. (218 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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