STRINGSTRING
PTSG_00265 PTSG_00265 PTSG_01665 PTSG_01665 PTSG_01878 PTSG_01878 PTSG_11738 PTSG_11738 PTSG_01549 PTSG_01549 PTSG_01119 PTSG_01119 PTSG_02106 PTSG_02106 PTSG_03820 PTSG_03820 PTSG_05615 PTSG_05615 PTSG_07950 PTSG_07950 PTSG_08324 PTSG_08324
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00265Cathepsin Z; Belongs to the peptidase C1 family. (299 aa)
PTSG_01665Cathepsin D; Belongs to the peptidase A1 family. (385 aa)
PTSG_01878Uncharacterized protein; Belongs to the peptidase M16 family. (1084 aa)
PTSG_11738Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (933 aa)
PTSG_01549Legumain. (456 aa)
PTSG_01119Uncharacterized protein; Belongs to the peptidase C1 family. (389 aa)
PTSG_02106Cathepsin Z; Belongs to the peptidase C1 family. (884 aa)
PTSG_03820Uncharacterized protein; Belongs to the peptidase S10 family. (482 aa)
PTSG_05615Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (664 aa)
PTSG_07950Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (381 aa)
PTSG_08324Cysteine protease; Belongs to the peptidase C1 family. (347 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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