STRINGSTRING
PTSG_00516 PTSG_00516 PTSG_01005 PTSG_01005 PTSG_02541 PTSG_02541 PTSG_02884 PTSG_02884 PTSG_03964 PTSG_03964 PTSG_04716 PTSG_04716 PTSG_10998 PTSG_10998
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00516Uncharacterized protein. (6014 aa)
PTSG_01005Uncharacterized protein. (613 aa)
PTSG_02541WD_REPEATS_REGION domain-containing protein. (693 aa)
PTSG_02884Ubiquitin. (262 aa)
PTSG_03964Ubiquitin. (156 aa)
PTSG_04716Uncharacterized protein. (214 aa)
PTSG_10998Uncharacterized protein. (341 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.