STRINGSTRING
PTSG_00344 PTSG_00344 PTSG_02737 PTSG_02737 PTSG_04101 PTSG_04101 PTSG_04332 PTSG_04332 PTSG_04800 PTSG_04800 PTSG_05884 PTSG_05884 PTSG_07962 PTSG_07962 PTSG_08035 PTSG_08035 PTSG_08104 PTSG_08104 PTSG_08875 PTSG_08875 PTSG_09370 PTSG_09370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00344NEDD8-activating enzyme E1 catalytic subunit. (441 aa)
PTSG_02737Uncharacterized protein. (637 aa)
PTSG_04101TIP120 domain-containing protein. (1240 aa)
PTSG_04332CULLIN_2 domain-containing protein; Belongs to the cullin family. (770 aa)
PTSG_04800Ring-box protein 1. (125 aa)
PTSG_05884Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (106 aa)
PTSG_07962Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (280 aa)
PTSG_08035CULLIN_2 domain-containing protein; Belongs to the cullin family. (850 aa)
PTSG_08104Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (203 aa)
PTSG_08875NEDD8-activating enzyme E1 regulatory subunit. (525 aa)
PTSG_09370UBIQUITIN_CONJUGAT_2 domain-containing protein. (179 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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