(54 nodes) Mixed, incl. Histone deacetylase complex, and Histone acetyltransferase complex network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00020	Uncharacterized protein. (777 aa)
	PTSG_11575	Uncharacterized protein. (222 aa)
	PTSG_00477	Uncharacterized protein. (1546 aa)
	PTSG_11773	SANT_DAMP1_like domain-containing protein. (597 aa)
	PTSG_01570	Uncharacterized protein. (1332 aa)
	PTSG_01147	RuvB-like helicase; Belongs to the RuvB family. (513 aa)
	PTSG_02201	Non-muscle actin. (376 aa)
	PTSG_02326	Uncharacterized protein; Belongs to the actin family. (406 aa)
	PTSG_11879	Uncharacterized protein. (978 aa)
	PTSG_02424	Uncharacterized protein. (204 aa)
	PTSG_03021	TIR domain-containing protein. (420 aa)
	PTSG_11976	SANT domain-containing protein. (822 aa)
	PTSG_03221	Uncharacterized protein. (1130 aa)
	PTSG_03649	Uncharacterized protein. (718 aa)
	PTSG_12066	BCNT-C domain-containing protein. (276 aa)
	PTSG_04147	MRG domain-containing protein. (181 aa)
	PTSG_04175	Uncharacterized protein; Belongs to the actin family. (778 aa)
	PTSG_04243	Uncharacterized protein. (582 aa)
	PTSG_04247	Uncharacterized protein. (386 aa)
	PTSG_04268	Uncharacterized protein; Belongs to the actin family. (676 aa)
	PTSG_03996	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (460 aa)
	PTSG_12193	Uncharacterized protein. (2049 aa)
	PTSG_04320	Enhancer of polycomb-like protein. (637 aa)
	PTSG_04522	MRG domain-containing protein. (277 aa)
	PTSG_04979	RuvB-like helicase; Belongs to the RuvB family. (455 aa)
	PTSG_05065	Inhibitor of growth protein. (281 aa)
	PTSG_05393	Uncharacterized protein. (760 aa)
	PTSG_05529	Uncharacterized protein. (483 aa)
	PTSG_06212	Uncharacterized protein. (252 aa)
	PTSG_12430	RING-type domain-containing protein. (1116 aa)
	PTSG_12442	Uncharacterized protein. (1313 aa)
	PTSG_05903	Uncharacterized protein. (4121 aa)
	PTSG_05978	Amine oxidase. (479 aa)
	PTSG_06056	Uncharacterized protein. (406 aa)
	PTSG_07109	HIT-type domain-containing protein. (278 aa)
	PTSG_07120	Uncharacterized protein. (686 aa)
	PTSG_12481	Uncharacterized protein; Belongs to the actin family. (455 aa)
	PTSG_06661	Snf family helicase. (3098 aa)
	PTSG_07394	Inhibitor of growth protein. (252 aa)
	PTSG_07363	MRG domain-containing protein. (281 aa)
	PTSG_08588	Uncharacterized protein. (94 aa)
	PTSG_09620	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (362 aa)
	PTSG_09651	D-2-hydroxyglutarate dehydrogenase. (515 aa)
	PTSG_12819	Uncharacterized protein. (1757 aa)
	PTSG_09405	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (419 aa)
	PTSG_12991	NFRKB_winged domain-containing protein. (772 aa)
	PTSG_10465	FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (455 aa)
	PTSG_10709	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (397 aa)
	PTSG_10267	BRG1 protein. (1726 aa)
	PTSG_10955	HDAC_interact domain-containing protein. (1581 aa)
	PTSG_10989	HDAC9 protein. (642 aa)
	PTSG_10994	HMG box domain-containing protein. (809 aa)
	PTSG_11372	Uncharacterized protein. (717 aa)
	PTSG_11436	PHD-type domain-containing protein. (672 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00020	PTSG_01147	F2TVA8	F2U0Y1	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.817
PTSG_00020	PTSG_02424	F2TVA8	F2U261	Uncharacterized protein.	Uncharacterized protein.	0.850
PTSG_00020	PTSG_03996	F2TVA8	F2U7H2	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.456
PTSG_00020	PTSG_04147	F2TVA8	F2U6R0	Uncharacterized protein.	MRG domain-containing protein.	0.627
PTSG_00020	PTSG_04320	F2TVA8	F2U876	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.728
PTSG_00020	PTSG_04522	F2TVA8	F2U8T7	Uncharacterized protein.	MRG domain-containing protein.	0.627
PTSG_00020	PTSG_04979	F2TVA8	F2U963	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.854
PTSG_00020	PTSG_07363	F2TVA8	F2UJ73	Uncharacterized protein.	MRG domain-containing protein.	0.627
PTSG_00020	PTSG_07394	F2TVA8	F2UIK4	Uncharacterized protein.	Inhibitor of growth protein.	0.590
PTSG_00020	PTSG_09620	F2TVA8	F2ULI6	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.456
PTSG_00020	PTSG_09651	F2TVA8	F2ULL4	Uncharacterized protein.	D-2-hydroxyglutarate dehydrogenase.	0.590
PTSG_00020	PTSG_10709	F2TVA8	F2UQ57	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.456
PTSG_00020	PTSG_11436	F2TVA8	F2UTF3	Uncharacterized protein.	PHD-type domain-containing protein.	0.430
PTSG_00020	PTSG_11773	F2TVA8	F2TYR1	Uncharacterized protein.	SANT_DAMP1_like domain-containing protein.	0.797
PTSG_00020	PTSG_12481	F2TVA8	F2UEQ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.697
PTSG_00477	PTSG_04268	F2TWK8	F2U731	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.486
PTSG_00477	PTSG_04979	F2TWK8	F2U963	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.479
PTSG_00477	PTSG_10955	F2TWK8	F2USA2	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.440
PTSG_00477	PTSG_11976	F2TWK8	F2U4G6	Uncharacterized protein.	SANT domain-containing protein.	0.438
PTSG_00477	PTSG_12991	F2TWK8	F2UPG2	Uncharacterized protein.	NFRKB_winged domain-containing protein.	0.400

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