STRINGSTRING
PTSG_01147 PTSG_01147 PTSG_02201 PTSG_02201 PTSG_04175 PTSG_04175 PTSG_04247 PTSG_04247 PTSG_04268 PTSG_04268 PTSG_04979 PTSG_04979 PTSG_12481 PTSG_12481 PTSG_06661 PTSG_06661 PTSG_12991 PTSG_12991 PTSG_10267 PTSG_10267
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_01147RuvB-like helicase; Belongs to the RuvB family. (513 aa)
PTSG_02201Non-muscle actin. (376 aa)
PTSG_04175Uncharacterized protein; Belongs to the actin family. (778 aa)
PTSG_04247Uncharacterized protein. (386 aa)
PTSG_04268Uncharacterized protein; Belongs to the actin family. (676 aa)
PTSG_04979RuvB-like helicase; Belongs to the RuvB family. (455 aa)
PTSG_12481Uncharacterized protein; Belongs to the actin family. (455 aa)
PTSG_06661Snf family helicase. (3098 aa)
PTSG_12991NFRKB_winged domain-containing protein. (772 aa)
PTSG_10267BRG1 protein. (1726 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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