(23 nodes) Intraciliary transport particle network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00565	TTC26 protein. (555 aa)
	PTSG_01536	Uncharacterized protein; Belongs to the glycosyl hydrolase 43 family. (364 aa)
	PTSG_01098	Uncharacterized protein. (426 aa)
	PTSG_02307	F5/8 type C domain-containing protein. (139 aa)
	PTSG_02364	Intraflagellar transporter IFT43. (351 aa)
	PTSG_11988	WD_REPEATS_REGION domain-containing protein. (1211 aa)
	PTSG_12128	eIF2A domain-containing protein. (1380 aa)
	PTSG_04119	DUF4201 domain-containing protein. (878 aa)
	PTSG_04592	Uncharacterized protein. (572 aa)
	PTSG_04872	Uncharacterized protein. (163 aa)
	PTSG_05546	WD repeat-containing protein 35. (1163 aa)
	PTSG_06337	Uncharacterized protein. (134 aa)
	PTSG_07233	CDV-1R protein. (618 aa)
	PTSG_06985	Uncharacterized protein. (390 aa)
	PTSG_12640	Uncharacterized protein. (1330 aa)
	PTSG_07943	Tetratricopeptide repeat protein 30. (612 aa)
	PTSG_07732	Uncharacterized protein. (1739 aa)
	PTSG_07451	WD_REPEATS_REGION domain-containing protein. (764 aa)
	PTSG_09414	CGI-53 protein. (421 aa)
	PTSG_10721	Uncharacterized protein. (186 aa)
	PTSG_10740	Uncharacterized protein. (1352 aa)
	PTSG_10898	Uncharacterized protein. (301 aa)
	PTSG_11061	Uncharacterized protein. (850 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00565	PTSG_01098	F2TWU6	F2U0T3	TTC26 protein.	Uncharacterized protein.	0.982
PTSG_00565	PTSG_01536	F2TWU6	F2U0M5	TTC26 protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 43 family.	0.929
PTSG_00565	PTSG_02307	F2TWU6	F2U1U0	TTC26 protein.	F5/8 type C domain-containing protein.	0.845
PTSG_00565	PTSG_02364	F2TWU6	F2U1Z6	TTC26 protein.	Intraflagellar transporter IFT43.	0.982
PTSG_00565	PTSG_04119	F2TWU6	F2U6M9	TTC26 protein.	DUF4201 domain-containing protein.	0.944
PTSG_00565	PTSG_04592	F2TWU6	F2U7V8	TTC26 protein.	Uncharacterized protein.	0.959
PTSG_00565	PTSG_04872	F2TWU6	F2U8V6	TTC26 protein.	Uncharacterized protein.	0.432
PTSG_00565	PTSG_05546	F2TWU6	F2UBI5	TTC26 protein.	WD repeat-containing protein 35.	0.755
PTSG_00565	PTSG_06337	F2TWU6	F2UCM0	TTC26 protein.	Uncharacterized protein.	0.833
PTSG_00565	PTSG_06985	F2TWU6	F2UFD6	TTC26 protein.	Uncharacterized protein.	0.926
PTSG_00565	PTSG_07233	F2TWU6	F2UEF9	TTC26 protein.	CDV-1R protein.	0.974
PTSG_00565	PTSG_07451	F2TWU6	F2UIR8	TTC26 protein.	WD_REPEATS_REGION domain-containing protein.	0.972
PTSG_00565	PTSG_07732	F2TWU6	F2UHL9	TTC26 protein.	Uncharacterized protein.	0.957
PTSG_00565	PTSG_07943	F2TWU6	F2UGS4	TTC26 protein.	Tetratricopeptide repeat protein 30.	0.975
PTSG_00565	PTSG_09414	F2TWU6	F2UMJ9	TTC26 protein.	CGI-53 protein.	0.985
PTSG_00565	PTSG_10721	F2TWU6	F2UQ70	TTC26 protein.	Uncharacterized protein.	0.841
PTSG_00565	PTSG_10740	F2TWU6	F2UQ88	TTC26 protein.	Uncharacterized protein.	0.769
PTSG_00565	PTSG_10898	F2TWU6	F2URB7	TTC26 protein.	Uncharacterized protein.	0.975
PTSG_00565	PTSG_11061	F2TWU6	F2US11	TTC26 protein.	Uncharacterized protein.	0.985
PTSG_00565	PTSG_11988	F2TWU6	F2U4R0	TTC26 protein.	WD_REPEATS_REGION domain-containing protein.	0.842

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