STRINGSTRING
PTSG_01983 PTSG_01983 PTSG_03408 PTSG_03408 PTSG_04634 PTSG_04634 PTSG_07711 PTSG_07711 PTSG_08542 PTSG_08542 PTSG_12827 PTSG_12827 PTSG_10222 PTSG_10222
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_01983MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (440 aa)
PTSG_03408AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
PTSG_04634AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (608 aa)
PTSG_07711ENTH domain-containing protein. (628 aa)
PTSG_08542AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (903 aa)
PTSG_12827MHD domain-containing protein. (1662 aa)
PTSG_10222Uncharacterized protein. (314 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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