STRINGSTRING
PTSG_00446 PTSG_00446 PTSG_00627 PTSG_00627 PTSG_01490 PTSG_01490 PTSG_02809 PTSG_02809 PTSG_04249 PTSG_04249 PTSG_04865 PTSG_04865 PTSG_05196 PTSG_05196 PTSG_06892 PTSG_06892 PTSG_07479 PTSG_07479 PTSG_07337 PTSG_07337 PTSG_12720 PTSG_12720 PTSG_09507 PTSG_09507 PTSG_10697 PTSG_10697 PTSG_10947 PTSG_10947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00446Kinase ATR; Belongs to the PI3/PI4-kinase family. (3470 aa)
PTSG_00627Uncharacterized protein. (491 aa)
PTSG_01490RPA_C domain-containing protein. (294 aa)
PTSG_02809Uncharacterized protein. (1571 aa)
PTSG_04249FHA domain-containing protein. (442 aa)
PTSG_04865AAA_23 domain-containing protein. (1087 aa)
PTSG_05196Uncharacterized protein. (1412 aa)
PTSG_06892Uncharacterized protein. (817 aa)
PTSG_07479RecQ5. (1451 aa)
PTSG_07337DUF1767 domain-containing protein. (597 aa)
PTSG_12720Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2826 aa)
PTSG_09507Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (729 aa)
PTSG_10697DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1137 aa)
PTSG_10947Replication protein A subunit. (601 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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