STRINGSTRING
PTSG_00392 PTSG_00392 PTSG_00592 PTSG_00592 PTSG_01203 PTSG_01203 PTSG_05749 PTSG_05749 PTSG_06320 PTSG_06320 PTSG_12543 PTSG_12543 PTSG_06727 PTSG_06727 PTSG_07908 PTSG_07908 PTSG_08033 PTSG_08033 PTSG_12709 PTSG_12709 PTSG_08607 PTSG_08607
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00392Protein kinase domain-containing protein. (245 aa)
PTSG_00592AAA domain-containing protein. (632 aa)
PTSG_01203Mcm10 domain-containing protein. (786 aa)
PTSG_05749AAA domain-containing protein. (785 aa)
PTSG_06320CDT1 domain-containing protein. (793 aa)
PTSG_12543DNA helicase; Belongs to the MCM family. (1619 aa)
PTSG_06727ORC_WH_C domain-containing protein. (116 aa)
PTSG_07908BAH domain-containing protein. (1036 aa)
PTSG_08033DNA replication licensing factor MCM9; Belongs to the MCM family. (1237 aa)
PTSG_12709AAA_16 domain-containing protein. (464 aa)
PTSG_08607Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (856 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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