STRINGSTRING
PTSG_00713 PTSG_00713 PTSG_01692 PTSG_01692 PTSG_02234 PTSG_02234 PTSG_03256 PTSG_03256 PTSG_04681 PTSG_04681 PTSG_04834 PTSG_04834 PTSG_06582 PTSG_06582 PTSG_08615 PTSG_08615 PTSG_09063 PTSG_09063 PTSG_10462 PTSG_10462 PTSG_10373 PTSG_10373 PTSG_10859 PTSG_10859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00713SMT3 protein. (104 aa)
PTSG_01692ThiF domain-containing protein. (340 aa)
PTSG_02234Uncharacterized protein. (973 aa)
PTSG_03256Uncharacterized protein. (597 aa)
PTSG_04681DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1795 aa)
PTSG_04834Uncharacterized protein. (646 aa)
PTSG_06582SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. (629 aa)
PTSG_08615Uncharacterized protein. (594 aa)
PTSG_09063DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (791 aa)
PTSG_10462ULP_PROTEASE domain-containing protein. (1815 aa)
PTSG_10373Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family. (113 aa)
PTSG_10859Uncharacterized protein. (828 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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