STRINGSTRING
PTSG_00247 PTSG_00247 PTSG_01841 PTSG_01841 PTSG_01229 PTSG_01229 PTSG_02393 PTSG_02393 PTSG_03748 PTSG_03748 PTSG_04653 PTSG_04653 PTSG_06816 PTSG_06816 PTSG_08112 PTSG_08112 PTSG_13142 PTSG_13142 PTSG_11015 PTSG_11015 PTSG_11136 PTSG_11136
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00247Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (250 aa)
PTSG_01841Uncharacterized protein. (196 aa)
PTSG_0122939S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (150 aa)
PTSG_02393Uncharacterized protein. (243 aa)
PTSG_03748Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (307 aa)
PTSG_0465330S ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family. (100 aa)
PTSG_06816Uncharacterized protein. (203 aa)
PTSG_08112Ribosomal_L18e/L15P domain-containing protein. (216 aa)
PTSG_13142MRP-L46 domain-containing protein. (300 aa)
PTSG_11015LSU ribosomal protein L13P. (195 aa)
PTSG_11136Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (311 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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