STRINGSTRING
PTSG_00124 PTSG_00124 PTSG_00374 PTSG_00374 PTSG_00419 PTSG_00419 PTSG_00948 PTSG_00948 PTSG_00967 PTSG_00967 PTSG_01067 PTSG_01067 PTSG_01779 PTSG_01779 PTSG_02034 PTSG_02034 PTSG_01520 PTSG_01520 PTSG_02548 PTSG_02548 PTSG_03014 PTSG_03014 PTSG_03331 PTSG_03331 PTSG_03361 PTSG_03361 PTSG_12097 PTSG_12097 PTSG_03941 PTSG_03941 PTSG_04552 PTSG_04552 PTSG_05295 PTSG_05295 PTSG_05094 PTSG_05094 PTSG_06419 PTSG_06419 PTSG_06764 PTSG_06764 PTSG_12503 PTSG_12503 PTSG_06978 PTSG_06978 PTSG_07591 PTSG_07591 PTSG_08012 PTSG_08012 PTSG_09886 PTSG_09886 PTSG_10085 PTSG_10085 PTSG_10691 PTSG_10691 PTSG_10831 PTSG_10831
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00124RNA helicase. (522 aa)
PTSG_00374Uncharacterized protein. (852 aa)
PTSG_00419Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (262 aa)
PTSG_00948Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (934 aa)
PTSG_00967Protein MAK16 homolog; Belongs to the MAK16 family. (340 aa)
PTSG_01067RRM domain-containing protein. (590 aa)
PTSG_01779Brix domain-containing protein. (461 aa)
PTSG_02034CP-type G domain-containing protein. (495 aa)
PTSG_01520Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (611 aa)
PTSG_02548Uncharacterized protein. (690 aa)
PTSG_03014SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (880 aa)
PTSG_03331GTP binding protein 4; Belongs to the sterol desaturase family. (635 aa)
PTSG_03361Uncharacterized protein. (269 aa)
PTSG_12097Uncharacterized protein. (476 aa)
PTSG_03941NLE domain-containing protein. (102 aa)
PTSG_04552Brix domain-containing protein. (326 aa)
PTSG_05295Brix domain-containing protein. (532 aa)
PTSG_05094Uncharacterized protein. (860 aa)
PTSG_06419PUM-HD domain-containing protein. (759 aa)
PTSG_06764Ribosome production factor 1. (444 aa)
PTSG_12503WD_REPEATS_REGION domain-containing protein. (399 aa)
PTSG_06978Nsun6 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (477 aa)
PTSG_07591Uncharacterized protein. (354 aa)
PTSG_0801260S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
PTSG_09886RNA helicase. (649 aa)
PTSG_10085Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (1030 aa)
PTSG_10691Uncharacterized protein. (1075 aa)
PTSG_10831Uncharacterized protein. (914 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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