STRINGSTRING
PTSG_00397 PTSG_00397 PTSG_00943 PTSG_00943 PTSG_00992 PTSG_00992 PTSG_02489 PTSG_02489 PTSG_12192 PTSG_12192 PTSG_06559 PTSG_06559 PTSG_08847 PTSG_08847 PTSG_10483 PTSG_10483 PTSG_10133 PTSG_10133 PTSG_11507 PTSG_11507
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00397RRM domain-containing protein. (395 aa)
PTSG_00943Polyadenylate binding protein. (765 aa)
PTSG_00992Polyadenylate binding protein. (642 aa)
PTSG_02489RRM domain-containing protein. (944 aa)
PTSG_12192Uncharacterized protein. (1063 aa)
PTSG_06559Poly(A)-binding protein. (1688 aa)
PTSG_08847Pan3_PK domain-containing protein. (594 aa)
PTSG_10483UCH_1 domain-containing protein. (1191 aa)
PTSG_10133RNA exonuclease 4. (1142 aa)
PTSG_11507USP domain-containing protein. (344 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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