(80 nodes) Nuclear transport, and Postmitotic nuclear pore complex (NPC) reformation network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00011	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (673 aa)
	PTSG_00047	ULP_PROTEASE domain-containing protein. (1797 aa)
	PTSG_11556	Importin N-terminal domain-containing protein. (878 aa)
	PTSG_11579	Importin N-terminal domain-containing protein. (915 aa)
	PTSG_11587	Nuclear pore protein. (765 aa)
	PTSG_00853	Uncharacterized protein. (1955 aa)
	PTSG_11683	Uncharacterized protein. (634 aa)
	PTSG_01577	Uncharacterized protein. (439 aa)
	PTSG_01927	Uncharacterized protein. (1912 aa)
	PTSG_01367	Peptidase S59 domain-containing protein. (2081 aa)
	PTSG_01472	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	PTSG_01127	Uncharacterized protein. (724 aa)
	PTSG_02506	Uncharacterized protein. (727 aa)
	PTSG_02512	TPR_MLP1_2 domain-containing protein. (2322 aa)
	PTSG_02699	Uncharacterized protein. (263 aa)
	PTSG_02777	Uncharacterized protein. (390 aa)
	PTSG_02852	Uncharacterized protein. (945 aa)
	PTSG_03188	Ran-binding protein 1. (1546 aa)
	PTSG_12024	WW domain-containing protein. (956 aa)
	PTSG_03810	Uncharacterized protein. (445 aa)
	PTSG_12057	Importin N-terminal domain-containing protein. (999 aa)
	PTSG_03899	Uncharacterized protein. (412 aa)
	PTSG_03922	Cellular apoptosis susceptibility protein. (956 aa)
	PTSG_04032	WD_REPEATS_REGION domain-containing protein. (324 aa)
	PTSG_04428	Nuclear export factor CRM1. (1083 aa)
	PTSG_05380	Uncharacterized protein. (510 aa)
	PTSG_05395	Uncharacterized protein. (1258 aa)
	PTSG_05089	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (485 aa)
	PTSG_05167	Uncharacterized protein. (1515 aa)
	PTSG_05776	Uncharacterized protein. (279 aa)
	PTSG_05477	Uncharacterized protein. (1854 aa)
	PTSG_05584	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (989 aa)
	PTSG_05612	Importin subunit alpha; Belongs to the importin alpha family. (573 aa)
	PTSG_05634	Uncharacterized protein. (487 aa)
	PTSG_06401	Uncharacterized protein. (1604 aa)
	PTSG_05800	WD_REPEATS_REGION domain-containing protein. (349 aa)
	PTSG_07063	Uncharacterized protein. (600 aa)
	PTSG_07088	Uncharacterized protein. (2505 aa)
	PTSG_07107	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (585 aa)
	PTSG_06914	Uncharacterized protein. (1405 aa)
	PTSG_06669	Uncharacterized protein. (526 aa)
	PTSG_06499	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (222 aa)
	PTSG_07759	Uncharacterized protein. (1120 aa)
	PTSG_07763	Uncharacterized protein. (1496 aa)
	PTSG_07524	WD_REPEATS_REGION domain-containing protein. (280 aa)
	PTSG_07675	GH16 domain-containing protein. (301 aa)
	PTSG_07708	Xpo1 domain-containing protein. (935 aa)
	PTSG_08127	Importin subunit alpha; Belongs to the importin alpha family. (531 aa)
	PTSG_08134	Uncharacterized protein. (759 aa)
	PTSG_08485	Uncharacterized protein. (879 aa)
	PTSG_12745	Uncharacterized protein. (1791 aa)
	PTSG_08523	Uncharacterized protein. (405 aa)
	PTSG_08585	Uncharacterized protein. (297 aa)
	PTSG_08661	Importin subunit alpha; Belongs to the importin alpha family. (517 aa)
	PTSG_12770	Uncharacterized protein. (1615 aa)
	PTSG_12783	Uncharacterized protein. (284 aa)
	PTSG_08748	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (192 aa)
	PTSG_12788	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (291 aa)
	PTSG_12904	Importin N-terminal domain-containing protein. (668 aa)
	PTSG_12812	Uncharacterized protein. (339 aa)
	PTSG_09041	Xpo1 domain-containing protein. (858 aa)
	PTSG_09051	Uncharacterized protein. (2258 aa)
	PTSG_09363	Nup54 domain-containing protein. (613 aa)
	PTSG_09439	Nsp1_C domain-containing protein. (444 aa)
	PTSG_09205	CRM1_C domain-containing protein. (1028 aa)
	PTSG_09270	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (178 aa)
	PTSG_12861	Uncharacterized protein. (415 aa)
	PTSG_10487	RanBD1 domain-containing protein. (563 aa)
	PTSG_10512	RRM Nup35-type domain-containing protein. (458 aa)
	PTSG_10126	Uncharacterized protein. (330 aa)
	PTSG_10202	Uncharacterized protein. (224 aa)
	PTSG_10279	Uncharacterized protein. (338 aa)
	PTSG_10324	Uncharacterized protein. (969 aa)
	PTSG_10377	Importin N-terminal domain-containing protein. (1085 aa)
	PTSG_11090	Nucleoporin_N domain-containing protein. (1114 aa)
	PTSG_10958	GRIP domain-containing protein. (1017 aa)
	PTSG_11216	Uncharacterized protein. (325 aa)
	PTSG_11393	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (297 aa)
	PTSG_11424	WD-40 repeat protein. (1885 aa)
	PTSG_11514	Xpo1 domain-containing protein. (385 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00011	PTSG_01127	F2TV99	F2U0W2	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Uncharacterized protein.	0.548
PTSG_00011	PTSG_02852	F2TV99	F2U3I3	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Uncharacterized protein.	0.577
PTSG_00011	PTSG_03188	F2TV99	F2U4H0	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Ran-binding protein 1.	0.604
PTSG_00011	PTSG_03922	F2TV99	F2U796	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Cellular apoptosis susceptibility protein.	0.601
PTSG_00011	PTSG_04428	F2TV99	F2U8J1	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Nuclear export factor CRM1.	0.639
PTSG_00011	PTSG_06499	F2TV99	F2UFZ5	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.997
PTSG_00011	PTSG_07763	F2TV99	F2UG96	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Uncharacterized protein.	0.728
PTSG_00011	PTSG_09041	F2TV99	F2UM16	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Xpo1 domain-containing protein.	0.639
PTSG_00011	PTSG_09205	F2TV99	F2UN08	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	CRM1_C domain-containing protein.	0.432
PTSG_00011	PTSG_10377	F2TV99	F2UR49	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin N-terminal domain-containing protein.	0.547
PTSG_00011	PTSG_11514	F2TV99	F2UTQ2	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Xpo1 domain-containing protein.	0.548
PTSG_00011	PTSG_11556	F2TV99	F2TVP9	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin N-terminal domain-containing protein.	0.489
PTSG_00011	PTSG_11683	F2TV99	F2TYA5	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Uncharacterized protein.	0.574
PTSG_00011	PTSG_12057	F2TV99	F2U690	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin N-terminal domain-containing protein.	0.476
PTSG_00011	PTSG_12904	F2TV99	F2ULJ6	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin N-terminal domain-containing protein.	0.494
PTSG_00047	PTSG_02512	F2TVD5	F2U2E8	ULP_PROTEASE domain-containing protein.	TPR_MLP1_2 domain-containing protein.	0.513
PTSG_00047	PTSG_02777	F2TVD5	F2U3A3	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.654
PTSG_00047	PTSG_03188	F2TVD5	F2U4H0	ULP_PROTEASE domain-containing protein.	Ran-binding protein 1.	0.422
PTSG_00047	PTSG_05612	F2TVD5	F2UBQ0	ULP_PROTEASE domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.654
PTSG_00047	PTSG_08127	F2TVD5	F2UI27	ULP_PROTEASE domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.654

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