(27 nodes) SUMOylation of chromatin organization proteins network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_11587	Nuclear pore protein. (765 aa)
	PTSG_00853	Uncharacterized protein. (1955 aa)
	PTSG_11683	Uncharacterized protein. (634 aa)
	PTSG_01927	Uncharacterized protein. (1912 aa)
	PTSG_01367	Peptidase S59 domain-containing protein. (2081 aa)
	PTSG_02512	TPR_MLP1_2 domain-containing protein. (2322 aa)
	PTSG_03188	Ran-binding protein 1. (1546 aa)
	PTSG_03810	Uncharacterized protein. (445 aa)
	PTSG_04032	WD_REPEATS_REGION domain-containing protein. (324 aa)
	PTSG_05167	Uncharacterized protein. (1515 aa)
	PTSG_05477	Uncharacterized protein. (1854 aa)
	PTSG_05584	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (989 aa)
	PTSG_05800	WD_REPEATS_REGION domain-containing protein. (349 aa)
	PTSG_07107	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (585 aa)
	PTSG_06914	Uncharacterized protein. (1405 aa)
	PTSG_06669	Uncharacterized protein. (526 aa)
	PTSG_07763	Uncharacterized protein. (1496 aa)
	PTSG_07524	WD_REPEATS_REGION domain-containing protein. (280 aa)
	PTSG_12770	Uncharacterized protein. (1615 aa)
	PTSG_09363	Nup54 domain-containing protein. (613 aa)
	PTSG_09439	Nsp1_C domain-containing protein. (444 aa)
	PTSG_10487	RanBD1 domain-containing protein. (563 aa)
	PTSG_10512	RRM Nup35-type domain-containing protein. (458 aa)
	PTSG_10126	Uncharacterized protein. (330 aa)
	PTSG_11090	Nucleoporin_N domain-containing protein. (1114 aa)
	PTSG_10958	GRIP domain-containing protein. (1017 aa)
	PTSG_11393	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (297 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00853	PTSG_01367	F2TXN7	F2U050	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.787
PTSG_00853	PTSG_01927	F2TXN7	F2TZC9	Uncharacterized protein.	Uncharacterized protein.	0.983
PTSG_00853	PTSG_02512	F2TXN7	F2U2E8	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.757
PTSG_00853	PTSG_03188	F2TXN7	F2U4H0	Uncharacterized protein.	Ran-binding protein 1.	0.984
PTSG_00853	PTSG_03810	F2TXN7	F2U5G3	Uncharacterized protein.	Uncharacterized protein.	0.958
PTSG_00853	PTSG_04032	F2TXN7	F2U7K8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.896
PTSG_00853	PTSG_05167	F2TXN7	F2UAP8	Uncharacterized protein.	Uncharacterized protein.	0.924
PTSG_00853	PTSG_05477	F2TXN7	F2UBB7	Uncharacterized protein.	Uncharacterized protein.	0.940
PTSG_00853	PTSG_05584	F2TXN7	F2UBM3	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.947
PTSG_00853	PTSG_05800	F2TXN7	F2UCU0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.922
PTSG_00853	PTSG_06669	F2TXN7	F2UFN4	Uncharacterized protein.	Uncharacterized protein.	0.911
PTSG_00853	PTSG_06914	F2TXN7	F2UF61	Uncharacterized protein.	Uncharacterized protein.	0.787
PTSG_00853	PTSG_07107	F2TXN7	F2UE29	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.962
PTSG_00853	PTSG_07524	F2TXN7	F2UH06	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.725
PTSG_00853	PTSG_07763	F2TXN7	F2UG96	Uncharacterized protein.	Uncharacterized protein.	0.538
PTSG_00853	PTSG_09363	F2TXN7	F2UME8	Uncharacterized protein.	Nup54 domain-containing protein.	0.962
PTSG_00853	PTSG_09439	F2TXN7	F2UMM3	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.878
PTSG_00853	PTSG_10126	F2TXN7	F2UQD5	Uncharacterized protein.	Uncharacterized protein.	0.914
PTSG_00853	PTSG_10487	F2TXN7	F2UPT4	Uncharacterized protein.	RanBD1 domain-containing protein.	0.894
PTSG_00853	PTSG_10512	F2TXN7	F2UPV7	Uncharacterized protein.	RRM Nup35-type domain-containing protein.	0.960

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