STRINGSTRING
PTSG_00047 PTSG_00047 PTSG_11556 PTSG_11556 PTSG_01577 PTSG_01577 PTSG_02777 PTSG_02777 PTSG_05089 PTSG_05089 PTSG_05612 PTSG_05612 PTSG_08127 PTSG_08127 PTSG_08134 PTSG_08134 PTSG_08661 PTSG_08661 PTSG_10324 PTSG_10324 PTSG_10377 PTSG_10377
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00047ULP_PROTEASE domain-containing protein. (1797 aa)
PTSG_11556Importin N-terminal domain-containing protein. (878 aa)
PTSG_01577Uncharacterized protein. (439 aa)
PTSG_02777Uncharacterized protein. (390 aa)
PTSG_05089Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (485 aa)
PTSG_05612Importin subunit alpha; Belongs to the importin alpha family. (573 aa)
PTSG_08127Importin subunit alpha; Belongs to the importin alpha family. (531 aa)
PTSG_08134Uncharacterized protein. (759 aa)
PTSG_08661Importin subunit alpha; Belongs to the importin alpha family. (517 aa)
PTSG_10324Uncharacterized protein. (969 aa)
PTSG_10377Importin N-terminal domain-containing protein. (1085 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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