17 items (Salpingoeca rosetta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_11024	Uncharacterized protein. (255 aa)
	PTSG_12681	Kri1_C domain-containing protein. (202 aa)
	PTSG_12680	Uncharacterized protein. (543 aa)
	PTSG_06452	Uncharacterized protein. (163 aa)
	PTSG_05821	Uncharacterized protein. (147 aa)
	PTSG_05816	Uncharacterized protein. (280 aa)
	PTSG_05810	KH_dom_type_1 domain-containing protein. (264 aa)
	PTSG_06324	Serine/Threonine protein kinase. (801 aa)
	PTSG_04540	Uncharacterized protein. (382 aa)
	PTSG_02359	Rrp4-PA. (301 aa)
	PTSG_00419	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (262 aa)
	PTSG_00527	Uncharacterized protein. (378 aa)
	PTSG_00897	Uncharacterized protein. (304 aa)
	PTSG_01946	Uncharacterized protein. (628 aa)
	PTSG_01250	Uncharacterized protein. (859 aa)
	PTSG_11309	Bms1-type G domain-containing protein. (1064 aa)
	PTSG_07367	HRDC domain-containing protein. (848 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00419	PTSG_01250	F2TWF3	F2TZT2	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.931
PTSG_00419	PTSG_01946	F2TWF3	F2TZE9	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.797
PTSG_00419	PTSG_04540	F2TWF3	F2U7Q8	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.632
PTSG_00419	PTSG_05810	F2TWF3	F2UCV0	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	KH_dom_type_1 domain-containing protein.	0.404
PTSG_00419	PTSG_06324	F2TWF3	F2UCK8	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Serine/Threonine protein kinase.	0.709
PTSG_00419	PTSG_06452	F2TWF3	F2UFU7	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.513
PTSG_00419	PTSG_07367	F2TWF3	F2UJ77	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	HRDC domain-containing protein.	0.698
PTSG_00419	PTSG_11309	F2TWF3	F2UT13	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Bms1-type G domain-containing protein.	0.821
PTSG_00419	PTSG_12680	F2TWF3	F2UI17	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.442
PTSG_00419	PTSG_12681	F2TWF3	F2UI18	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Kri1_C domain-containing protein.	0.442
PTSG_00897	PTSG_02359	F2TXT1	F2U1Z1	Uncharacterized protein.	Rrp4-PA.	0.999
PTSG_00897	PTSG_04540	F2TXT1	F2U7Q8	Uncharacterized protein.	Uncharacterized protein.	0.782
PTSG_00897	PTSG_05810	F2TXT1	F2UCV0	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.998
PTSG_00897	PTSG_05816	F2TXT1	F2UCV7	Uncharacterized protein.	Uncharacterized protein.	0.999
PTSG_00897	PTSG_05821	F2TXT1	F2UCW2	Uncharacterized protein.	Uncharacterized protein.	0.969
PTSG_00897	PTSG_06324	F2TXT1	F2UCK8	Uncharacterized protein.	Serine/Threonine protein kinase.	0.867
PTSG_00897	PTSG_06452	F2TXT1	F2UFU7	Uncharacterized protein.	Uncharacterized protein.	0.721
PTSG_00897	PTSG_07367	F2TXT1	F2UJ77	Uncharacterized protein.	HRDC domain-containing protein.	0.998
PTSG_00897	PTSG_11024	F2TXT1	F2USH0	Uncharacterized protein.	Uncharacterized protein.	0.999
PTSG_00897	PTSG_11309	F2TXT1	F2UT13	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.874

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