STRINGSTRING
PTSG_00674 PTSG_00674 PTSG_11229 PTSG_11229 PTSG_10056 PTSG_10056 PTSG_09298 PTSG_09298 PTSG_08448 PTSG_08448 PTSG_08120 PTSG_08120 PTSG_08119 PTSG_08119 PTSG_03859 PTSG_03859 PTSG_01675 PTSG_01675 PTSG_00675 PTSG_00675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00674Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PTSG_11229Histone H2A; Belongs to the histone H2A family. (129 aa)
PTSG_10056Histone H2B; Belongs to the histone H2B family. (130 aa)
PTSG_09298Histone H3. (135 aa)
PTSG_08448Histone. (179 aa)
PTSG_08120Histone H2B; Belongs to the histone H2B family. (123 aa)
PTSG_08119Histone H3; Belongs to the histone H3 family. (136 aa)
PTSG_03859Histone H2A; Belongs to the histone H2A family. (177 aa)
PTSG_01675Histones H3 and H4. (140 aa)
PTSG_00675Histone H2A; Belongs to the histone H2A family. (133 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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