(18 nodes) Integral component of mitochondrial inner membrane network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_09806	Uncharacterized protein. (1243 aa)
	PTSG_00427	Uncharacterized protein. (218 aa)
	PTSG_00903	Uncharacterized protein. (775 aa)
	PTSG_00956	Uncharacterized protein. (1188 aa)
	PTSG_01711	Uncharacterized protein. (164 aa)
	PTSG_01726	Uncharacterized protein. (224 aa)
	PTSG_01372	26S protease regulatory subunit. (878 aa)
	PTSG_01116	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (623 aa)
	PTSG_03121	Sidoreflexin. (373 aa)
	PTSG_04293	Uncharacterized protein. (86 aa)
	PTSG_10551	Uncharacterized protein; Belongs to the BI1 family. (335 aa)
	PTSG_10593	MCU domain-containing protein. (338 aa)
	PTSG_11492	Uncharacterized protein; Belongs to the MICOS complex subunit Mic60 family. (637 aa)
	PTSG_05620	Sidoreflexin. (347 aa)
	PTSG_00330	Uncharacterized protein. (276 aa)
	PTSG_07193	Uncharacterized protein. (370 aa)
	PTSG_08149	Sideroflexin 5. (336 aa)
	PTSG_09695	AFG3-like protein 2. (834 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00330	PTSG_00956	F2TW66	F2TXZ5	Uncharacterized protein.	Uncharacterized protein.	0.411
PTSG_00330	PTSG_07193	F2TW66	F2UEB9	Uncharacterized protein.	Uncharacterized protein.	0.611
PTSG_00427	PTSG_01711	F2TWG1	F2TYQ7	Uncharacterized protein.	Uncharacterized protein.	0.995
PTSG_00427	PTSG_10593	F2TWG1	F2URT5	Uncharacterized protein.	MCU domain-containing protein.	0.457
PTSG_00956	PTSG_00330	F2TXZ5	F2TW66	Uncharacterized protein.	Uncharacterized protein.	0.411
PTSG_00956	PTSG_01711	F2TXZ5	F2TYQ7	Uncharacterized protein.	Uncharacterized protein.	0.437
PTSG_00956	PTSG_04293	F2TXZ5	F2U757	Uncharacterized protein.	Uncharacterized protein.	0.444
PTSG_00956	PTSG_07193	F2TXZ5	F2UEB9	Uncharacterized protein.	Uncharacterized protein.	0.669
PTSG_01372	PTSG_10593	F2U055	F2URT5	26S protease regulatory subunit.	MCU domain-containing protein.	0.585
PTSG_01711	PTSG_00427	F2TYQ7	F2TWG1	Uncharacterized protein.	Uncharacterized protein.	0.995
PTSG_01711	PTSG_00956	F2TYQ7	F2TXZ5	Uncharacterized protein.	Uncharacterized protein.	0.437
PTSG_01711	PTSG_07193	F2TYQ7	F2UEB9	Uncharacterized protein.	Uncharacterized protein.	0.600
PTSG_04293	PTSG_00956	F2U757	F2TXZ5	Uncharacterized protein.	Uncharacterized protein.	0.444
PTSG_07193	PTSG_00330	F2UEB9	F2TW66	Uncharacterized protein.	Uncharacterized protein.	0.611
PTSG_07193	PTSG_00956	F2UEB9	F2TXZ5	Uncharacterized protein.	Uncharacterized protein.	0.669
PTSG_07193	PTSG_01711	F2UEB9	F2TYQ7	Uncharacterized protein.	Uncharacterized protein.	0.600
PTSG_07193	PTSG_11492	F2UEB9	F2UTM3	Uncharacterized protein.	Uncharacterized protein; Belongs to the MICOS complex subunit Mic60 family.	0.412
PTSG_09695	PTSG_10593	F2UNS4	F2URT5	AFG3-like protein 2.	MCU domain-containing protein.	0.585
PTSG_10593	PTSG_00427	F2URT5	F2TWG1	MCU domain-containing protein.	Uncharacterized protein.	0.457
PTSG_10593	PTSG_01372	F2URT5	F2U055	MCU domain-containing protein.	26S protease regulatory subunit.	0.585

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