(10 nodes) Regulation of transcription elongation from RNA polymerase II promoter network (Salpingoeca rosetta)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

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Predicted Interactions

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Your Input:
	PTSG_02277	Uncharacterized protein. (490 aa)
	PTSG_00805	Protein kinase domain-containing protein. (1538 aa)
	PTSG_07378	Uncharacterized protein. (958 aa)
	PTSG_06563	Uncharacterized protein. (509 aa)
	PTSG_06463	Uncharacterized protein. (573 aa)
	PTSG_12333	Uncharacterized protein. (1839 aa)
	PTSG_12303	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (903 aa)
	PTSG_02514	Uncharacterized protein. (322 aa)
	PTSG_04225	S1 motif domain-containing protein. (1774 aa)
	PTSG_04238	Transcription elongation factor SPT4. (114 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00805	PTSG_02277	F2TXJ0	F2U1R0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.684
PTSG_00805	PTSG_04225	F2TXJ0	F2U6Y5	Protein kinase domain-containing protein.	S1 motif domain-containing protein.	0.620
PTSG_00805	PTSG_04238	F2TXJ0	F2U6Z8	Protein kinase domain-containing protein.	Transcription elongation factor SPT4.	0.848
PTSG_00805	PTSG_06563	F2TXJ0	F2UG61	Protein kinase domain-containing protein.	Uncharacterized protein.	0.649
PTSG_00805	PTSG_07378	F2TXJ0	F2UII8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.653
PTSG_02277	PTSG_00805	F2U1R0	F2TXJ0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.684
PTSG_02277	PTSG_04225	F2U1R0	F2U6Y5	Uncharacterized protein.	S1 motif domain-containing protein.	0.997
PTSG_02277	PTSG_04238	F2U1R0	F2U6Z8	Uncharacterized protein.	Transcription elongation factor SPT4.	0.997
PTSG_02277	PTSG_06563	F2U1R0	F2UG61	Uncharacterized protein.	Uncharacterized protein.	0.999
PTSG_04225	PTSG_00805	F2U6Y5	F2TXJ0	S1 motif domain-containing protein.	Protein kinase domain-containing protein.	0.620
PTSG_04225	PTSG_02277	F2U6Y5	F2U1R0	S1 motif domain-containing protein.	Uncharacterized protein.	0.997
PTSG_04225	PTSG_04238	F2U6Y5	F2U6Z8	S1 motif domain-containing protein.	Transcription elongation factor SPT4.	0.968
PTSG_04225	PTSG_06563	F2U6Y5	F2UG61	S1 motif domain-containing protein.	Uncharacterized protein.	0.927
PTSG_04238	PTSG_00805	F2U6Z8	F2TXJ0	Transcription elongation factor SPT4.	Protein kinase domain-containing protein.	0.848
PTSG_04238	PTSG_02277	F2U6Z8	F2U1R0	Transcription elongation factor SPT4.	Uncharacterized protein.	0.997
PTSG_04238	PTSG_04225	F2U6Z8	F2U6Y5	Transcription elongation factor SPT4.	S1 motif domain-containing protein.	0.968
PTSG_04238	PTSG_06463	F2U6Z8	F2UFV8	Transcription elongation factor SPT4.	Uncharacterized protein.	0.883
PTSG_04238	PTSG_06563	F2U6Z8	F2UG61	Transcription elongation factor SPT4.	Uncharacterized protein.	0.929
PTSG_04238	PTSG_07378	F2U6Z8	F2UII8	Transcription elongation factor SPT4.	Uncharacterized protein.	0.910
PTSG_06463	PTSG_04238	F2UFV8	F2U6Z8	Uncharacterized protein.	Transcription elongation factor SPT4.	0.883

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