40 items (Salpingoeca rosetta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_07853	KH type-2 domain-containing protein. (412 aa)
	PTSG_07591	Uncharacterized protein. (354 aa)
	PTSG_07597	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	PTSG_02697	Probable ribosome biogenesis protein PTSG_02697; Probable pre-rRNA processing protein involved in ribosome biogenesis. (333 aa)
	PTSG_02188	NUC153 domain-containing protein. (762 aa)
	PTSG_11836	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4118 aa)
	PTSG_12628	30S ribosomal protein S11. (244 aa)
	PTSG_08053	Uncharacterized protein. (1011 aa)
	PTSG_12680	Uncharacterized protein. (543 aa)
	PTSG_12681	Kri1_C domain-containing protein. (202 aa)
	PTSG_08455	Nucleoplasmin domain-containing protein. (351 aa)
	PTSG_08716	40S ribosomal protein S27. (85 aa)
	PTSG_08940	Uncharacterized protein. (478 aa)
	PTSG_01250	Uncharacterized protein. (859 aa)
	PTSG_01946	Uncharacterized protein. (628 aa)
	PTSG_13095	Utp12 domain-containing protein. (705 aa)
	PTSG_10152	Riok3 protein. (741 aa)
	PTSG_10186	MI domain-containing protein. (869 aa)
	PTSG_10839	WD_REPEATS_REGION domain-containing protein. (1090 aa)
	PTSG_11198	WD repeats and SOF1 domain-containing protein. (511 aa)
	PTSG_11309	Bms1-type G domain-containing protein. (1064 aa)
	PTSG_01917	Uncharacterized protein. (739 aa)
	PTSG_00527	Uncharacterized protein. (378 aa)
	PTSG_00419	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (262 aa)
	PTSG_00069	Uncharacterized protein. (738 aa)
	PTSG_00237	40S ribosomal protein S19. (147 aa)
	PTSG_04398	Uncharacterized protein. (1275 aa)
	PTSG_06405	Uncharacterized protein. (325 aa)
	PTSG_06324	Serine/Threonine protein kinase. (801 aa)
	PTSG_05815	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (219 aa)
	PTSG_05907	N-acetyltransferase domain-containing protein. (746 aa)
	PTSG_03107	Uncharacterized protein. (484 aa)
	PTSG_03192	WD_REPEATS_REGION domain-containing protein. (898 aa)
	PTSG_03092	Sas10 domain-containing protein. (541 aa)
	PTSG_02944	Uncharacterized protein. (233 aa)
	PTSG_03292	Atypical/RIO/RIO1 protein kinase. (713 aa)
	PTSG_03386	BING4CT domain-containing protein. (528 aa)
	PTSG_03457	Uncharacterized protein. (654 aa)
	PTSG_04684	Atypical/RIO/RIO2 protein kinase. (590 aa)
	PTSG_06852	30S ribosomal protein S7. (157 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00069	PTSG_00237	F2TVF7	F2TVX0	Uncharacterized protein.	40S ribosomal protein S19.	0.825
PTSG_00069	PTSG_00419	F2TVF7	F2TWF3	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.583
PTSG_00069	PTSG_01250	F2TVF7	F2TZT2	Uncharacterized protein.	Uncharacterized protein.	0.912
PTSG_00069	PTSG_01917	F2TVF7	F2TZC0	Uncharacterized protein.	Uncharacterized protein.	0.997
PTSG_00069	PTSG_01946	F2TVF7	F2TZE9	Uncharacterized protein.	Uncharacterized protein.	0.834
PTSG_00069	PTSG_02188	F2TVF7	F2U1G8	Uncharacterized protein.	NUC153 domain-containing protein.	0.989
PTSG_00069	PTSG_02944	F2TVF7	F2U3T0	Uncharacterized protein.	Uncharacterized protein.	0.693
PTSG_00069	PTSG_03092	F2TVF7	F2U479	Uncharacterized protein.	Sas10 domain-containing protein.	0.987
PTSG_00069	PTSG_03107	F2TVF7	F2U491	Uncharacterized protein.	Uncharacterized protein.	0.987
PTSG_00069	PTSG_03192	F2TVF7	F2U4H4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.979
PTSG_00069	PTSG_03292	F2TVF7	F2U4R9	Uncharacterized protein.	Atypical/RIO/RIO1 protein kinase.	0.494
PTSG_00069	PTSG_03386	F2TVF7	F2U520	Uncharacterized protein.	BING4CT domain-containing protein.	0.999
PTSG_00069	PTSG_03457	F2TVF7	F2U592	Uncharacterized protein.	Uncharacterized protein.	0.917
PTSG_00069	PTSG_04398	F2TVF7	F2U8F9	Uncharacterized protein.	Uncharacterized protein.	0.863
PTSG_00069	PTSG_04684	F2TVF7	F2U848	Uncharacterized protein.	Atypical/RIO/RIO2 protein kinase.	0.761
PTSG_00069	PTSG_05815	F2TVF7	F2UCV6	Uncharacterized protein.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.927
PTSG_00069	PTSG_05907	F2TVF7	F2UD48	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.998
PTSG_00069	PTSG_06324	F2TVF7	F2UCK8	Uncharacterized protein.	Serine/Threonine protein kinase.	0.993
PTSG_00069	PTSG_06405	F2TVF7	F2UBX9	Uncharacterized protein.	Uncharacterized protein.	0.983
PTSG_00069	PTSG_06852	F2TVF7	F2UEZ9	Uncharacterized protein.	30S ribosomal protein S7.	0.802

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