(42 nodes) Organelle fusion network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_05951	Uncharacterized protein. (611 aa)
	PTSG_06574	Uncharacterized protein. (337 aa)
	PTSG_07851	DUF2263 domain-containing protein. (470 aa)
	PTSG_07526	SynN domain-containing protein. (216 aa)
	PTSG_07632	Uncharacterized protein. (246 aa)
	PTSG_07434	Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family. (990 aa)
	PTSG_07505	t-SNARE coiled-coil homology domain-containing protein. (173 aa)
	PTSG_09484	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (779 aa)
	PTSG_09608	Uncharacterized protein. (639 aa)
	PTSG_09674	Synaptosomal-associated protein. (552 aa)
	PTSG_09400	Rab7 GTPase. (206 aa)
	PTSG_09110	Uncharacterized protein. (457 aa)
	PTSG_11070	Spatacsin_C domain-containing protein. (1717 aa)
	PTSG_11105	V-SNARE coiled-coil homology domain-containing protein. (145 aa)
	PTSG_11174	Uncharacterized protein. (1021 aa)
	PTSG_11540	Uncharacterized protein. (966 aa)
	PTSG_11552	TACC_C domain-containing protein. (526 aa)
	PTSG_00192	t-SNARE coiled-coil homology domain-containing protein. (217 aa)
	PTSG_00285	t-SNARE coiled-coil homology domain-containing protein. (106 aa)
	PTSG_11573	Uncharacterized protein. (440 aa)
	PTSG_00414	t-SNARE coiled-coil homology domain-containing protein. (247 aa)
	PTSG_00567	CNH domain-containing protein. (904 aa)
	PTSG_00877	V-SNARE coiled-coil homology domain-containing protein. (96 aa)
	PTSG_01770	Uncharacterized protein. (265 aa)
	PTSG_01771	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (650 aa)
	PTSG_01805	Uncharacterized protein. (259 aa)
	PTSG_01557	CNH domain-containing protein. (892 aa)
	PTSG_02136	Vps8 domain-containing protein. (1002 aa)
	PTSG_03276	Uncharacterized protein. (598 aa)
	PTSG_03298	Protein YIPF. (284 aa)
	PTSG_03305	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (301 aa)
	PTSG_03656	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (345 aa)
	PTSG_04161	t-SNARE coiled-coil homology domain-containing protein. (128 aa)
	PTSG_04352	V-SNARE coiled-coil homology domain-containing protein. (751 aa)
	PTSG_12177	Uncharacterized protein. (218 aa)
	PTSG_04823	Uncharacterized protein. (583 aa)
	PTSG_04842	Uncharacterized protein. (322 aa)
	PTSG_05416	t-SNARE coiled-coil homology domain-containing protein. (214 aa)
	PTSG_12323	Uncharacterized protein. (596 aa)
	PTSG_12329	Pep3_Vps18 domain-containing protein. (907 aa)
	PTSG_06329	KH domain-containing protein. (242 aa)
	PTSG_12511	Uncharacterized protein; Belongs to the synaptobrevin family. (241 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00192	PTSG_00285	F2TVS4	F2TW19	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.671
PTSG_00192	PTSG_00414	F2TVS4	F2TWE8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.999
PTSG_00192	PTSG_00567	F2TVS4	F2TWU8	t-SNARE coiled-coil homology domain-containing protein.	CNH domain-containing protein.	0.594
PTSG_00192	PTSG_00877	F2TVS4	F2TXR2	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.848
PTSG_00192	PTSG_01557	F2TVS4	F2U0P7	t-SNARE coiled-coil homology domain-containing protein.	CNH domain-containing protein.	0.972
PTSG_00192	PTSG_03305	F2TVS4	F2U4T1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.995
PTSG_00192	PTSG_03656	F2TVS4	F2U679	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.997
PTSG_00192	PTSG_04161	F2TVS4	F2U6S4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.966
PTSG_00192	PTSG_04352	F2TVS4	F2U8A8	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.763
PTSG_00192	PTSG_05416	F2TVS4	F2UAD4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.909
PTSG_00192	PTSG_06574	F2TVS4	F2UG74	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.972
PTSG_00192	PTSG_07434	F2TVS4	F2UIP7	t-SNARE coiled-coil homology domain-containing protein.	Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.	0.973
PTSG_00192	PTSG_07526	F2TVS4	F2UH08	t-SNARE coiled-coil homology domain-containing protein.	SynN domain-containing protein.	0.512
PTSG_00192	PTSG_07851	F2TVS4	F2UGI7	t-SNARE coiled-coil homology domain-containing protein.	DUF2263 domain-containing protein.	0.933
PTSG_00192	PTSG_09110	F2TVS4	F2UMR5	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.550
PTSG_00192	PTSG_09674	F2TVS4	F2ULN7	t-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein.	0.567
PTSG_00192	PTSG_11105	F2TVS4	F2US56	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.999
PTSG_00192	PTSG_11540	F2TVS4	F2TVH6	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.972
PTSG_00192	PTSG_12177	F2TVS4	F2U8L7	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.671
PTSG_00192	PTSG_12329	F2TVS4	F2UBE7	t-SNARE coiled-coil homology domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.972

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