STRINGSTRING
PTSG_05398 PTSG_05398 PTSG_02226 PTSG_02226 PTSG_03311 PTSG_03311 PTSG_03475 PTSG_03475 PTSG_05153 PTSG_05153 PTSG_06729 PTSG_06729 PTSG_12452 PTSG_12452 PTSG_09054 PTSG_09054
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_05398LAM_G_DOMAIN domain-containing protein. (391 aa)
PTSG_02226Laminin alpha 5 chain. (5486 aa)
PTSG_03311Uncharacterized protein. (1399 aa)
PTSG_03475EGF-like domain-containing protein. (2134 aa)
PTSG_05153Laminin alpha 5 chain. (2095 aa)
PTSG_06729Notch. (2986 aa)
PTSG_12452Uncharacterized protein. (2311 aa)
PTSG_09054Uncharacterized protein. (3976 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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