(28 nodes) Rho GTPase-activating protein domain network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_02874	Rho-GAP domain-containing protein. (152 aa)
	PTSG_03106	Uncharacterized protein. (681 aa)
	PTSG_03255	Uncharacterized protein. (1180 aa)
	PTSG_06036	Uncharacterized protein. (494 aa)
	PTSG_12281	Rho-GAP domain-containing protein. (204 aa)
	PTSG_12302	Uncharacterized protein. (1471 aa)
	PTSG_00043	Rho-GAP domain-containing protein. (1391 aa)
	PTSG_10895	Uncharacterized protein. (1047 aa)
	PTSG_03611	Rho-GAP domain-containing protein. (680 aa)
	PTSG_04698	ADP-ribosylation factor GTPase activating protein 1. (1516 aa)
	PTSG_04801	Uncharacterized protein. (952 aa)
	PTSG_12290	Rho-GAP domain-containing protein. (1015 aa)
	PTSG_11002	Rho-GAP domain-containing protein. (560 aa)
	PTSG_10609	Rho-GAP domain-containing protein. (1444 aa)
	PTSG_13068	Rho-GAP domain-containing protein. (893 aa)
	PTSG_04599	Uncharacterized protein. (950 aa)
	PTSG_00409	Preoptic area regulatory factor 2. (579 aa)
	PTSG_09416	Uncharacterized protein. (1376 aa)
	PTSG_12878	Rho-GAP domain-containing protein. (781 aa)
	PTSG_09015	Uncharacterized protein. (1625 aa)
	PTSG_08994	Rho-GAP domain-containing protein. (676 aa)
	PTSG_09581	Rho-GAP domain-containing protein. (885 aa)
	PTSG_06757	Uncharacterized protein. (354 aa)
	PTSG_01630	Uncharacterized protein. (697 aa)
	PTSG_01699	Uncharacterized protein. (838 aa)
	PTSG_01268	Rho-GAP domain-containing protein. (1195 aa)
	PTSG_02459	Uncharacterized protein. (1067 aa)
	PTSG_02614	Rho-GAP domain-containing protein. (431 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00409	PTSG_06036	F2TWE2	F2UDH7	Preoptic area regulatory factor 2.	Uncharacterized protein.	0.547
PTSG_01630	PTSG_09581	F2TYH8	F2ULE9	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.456
PTSG_01630	PTSG_12290	F2TYH8	F2UA08	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.478
PTSG_01699	PTSG_09581	F2TYP6	F2ULE9	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.456
PTSG_01699	PTSG_12290	F2TYP6	F2UA08	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.478
PTSG_04801	PTSG_09015	F2U9R0	F2ULY8	Uncharacterized protein.	Uncharacterized protein.	0.414
PTSG_06036	PTSG_00409	F2UDH7	F2TWE2	Uncharacterized protein.	Preoptic area regulatory factor 2.	0.547
PTSG_06036	PTSG_08994	F2UDH7	F2ULW7	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.655
PTSG_06036	PTSG_09015	F2UDH7	F2ULY8	Uncharacterized protein.	Uncharacterized protein.	0.664
PTSG_06036	PTSG_09581	F2UDH7	F2ULE9	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.421
PTSG_06036	PTSG_11002	F2UDH7	F2USF0	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.614
PTSG_06036	PTSG_12290	F2UDH7	F2UA08	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.421
PTSG_08994	PTSG_06036	F2ULW7	F2UDH7	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.655
PTSG_08994	PTSG_09015	F2ULW7	F2ULY8	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.759
PTSG_08994	PTSG_09581	F2ULW7	F2ULE9	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.499
PTSG_08994	PTSG_11002	F2ULW7	F2USF0	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.619
PTSG_08994	PTSG_12290	F2ULW7	F2UA08	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.499
PTSG_09015	PTSG_04801	F2ULY8	F2U9R0	Uncharacterized protein.	Uncharacterized protein.	0.414
PTSG_09015	PTSG_06036	F2ULY8	F2UDH7	Uncharacterized protein.	Uncharacterized protein.	0.664
PTSG_09015	PTSG_08994	F2ULY8	F2ULW7	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.759

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