(47 nodes) Small GTPase network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_03591	PH domain-containing protein. (310 aa)
	PTSG_04677	GTP-binding protein yptV1. (220 aa)
	PTSG_04341	GTPase. (1557 aa)
	PTSG_04403	Uncharacterized protein. (201 aa)
	PTSG_04712	Histidine-rich glycoprotein. (994 aa)
	PTSG_05320	Uncharacterized protein. (163 aa)
	PTSG_05191	Uncharacterized protein. (177 aa)
	PTSG_05504	Ras protein. (188 aa)
	PTSG_12374	Uncharacterized protein. (819 aa)
	PTSG_06733	Rac GTPase. (191 aa)
	PTSG_06887	Ras-1. (1552 aa)
	PTSG_06685	Rho1 GTPase. (193 aa)
	PTSG_06499	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (222 aa)
	PTSG_07615	EF-hand domain-containing protein. (439 aa)
	PTSG_08268	Ras family domain-containing protein. (228 aa)
	PTSG_08582	Uncharacterized protein. (220 aa)
	PTSG_08656	TKL/DICTY4 protein kinase. (916 aa)
	PTSG_08885	Rab5c. (198 aa)
	PTSG_08892	Rab family small GTPase. (197 aa)
	PTSG_09400	Rab7 GTPase. (206 aa)
	PTSG_09845	Uncharacterized protein. (56 aa)
	PTSG_10676	Small GTP binding protein RAB14. (211 aa)
	PTSG_10694	PH domain-containing protein. (677 aa)
	PTSG_03547	Rabl2a protein. (208 aa)
	PTSG_03436	Small GTP binding protein Rab9. (201 aa)
	PTSG_02104	Uncharacterized protein. (183 aa)
	PTSG_02365	Uncharacterized protein. (209 aa)
	PTSG_02125	Uncharacterized protein. (442 aa)
	PTSG_11696	Uncharacterized protein. (305 aa)
	PTSG_01405	Uncharacterized protein. (195 aa)
	PTSG_01401	Serine/threonine protein kinase. (592 aa)
	PTSG_01366	Tubulovesicle-associated protein. (214 aa)
	PTSG_01804	Rab1/RabD-family small GTPase. (203 aa)
	PTSG_01754	GTP-binding protein. (1337 aa)
	PTSG_11774	Uncharacterized protein. (186 aa)
	PTSG_00815	Rab2a protein. (1630 aa)
	PTSG_00801	Transforming protein ral. (194 aa)
	PTSG_00766	GTP-binding protein yptV3. (199 aa)
	PTSG_11628	J domain-containing protein. (334 aa)
	PTSG_11445	Small GTP binding protein RAB6A. (207 aa)
	PTSG_11406	RAB5C protein. (201 aa)
	PTSG_11005	Small GTP binding protein RAB8; Belongs to the complex I LYR family. (240 aa)
	PTSG_10198	Uncharacterized protein. (192 aa)
	PTSG_10721	Uncharacterized protein. (186 aa)
	PTSG_10710	Rab GTPase. (210 aa)
	PTSG_00306	ARHA protein. (191 aa)
	PTSG_00230	Uncharacterized protein. (223 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00230	PTSG_08268	F2TVW3	F2UIH4	Uncharacterized protein.	Ras family domain-containing protein.	0.569
PTSG_00230	PTSG_10721	F2TVW3	F2UQ70	Uncharacterized protein.	Uncharacterized protein.	0.604
PTSG_00306	PTSG_00801	F2TW39	F2TXI6	ARHA protein.	Transforming protein ral.	0.462
PTSG_00306	PTSG_02104	F2TW39	F2U2N0	ARHA protein.	Uncharacterized protein.	0.443
PTSG_00306	PTSG_02125	F2TW39	F2U1A1	ARHA protein.	Uncharacterized protein.	0.490
PTSG_00306	PTSG_03436	F2TW39	F2U570	ARHA protein.	Small GTP binding protein Rab9.	0.612
PTSG_00306	PTSG_03591	F2TW39	F2U615	ARHA protein.	PH domain-containing protein.	0.481
PTSG_00306	PTSG_05191	F2TW39	F2UAS1	ARHA protein.	Uncharacterized protein.	0.478
PTSG_00306	PTSG_05320	F2TW39	F2UA36	ARHA protein.	Uncharacterized protein.	0.476
PTSG_00306	PTSG_05504	F2TW39	F2UBE5	ARHA protein.	Ras protein.	0.471
PTSG_00306	PTSG_06685	F2TW39	F2UFQ0	ARHA protein.	Rho1 GTPase.	0.975
PTSG_00306	PTSG_06887	F2TW39	F2UF33	ARHA protein.	Ras-1.	0.406
PTSG_00306	PTSG_08582	F2TW39	F2UK36	ARHA protein.	Uncharacterized protein.	0.495
PTSG_00306	PTSG_09400	F2TW39	F2UMI5	ARHA protein.	Rab7 GTPase.	0.534
PTSG_00306	PTSG_11005	F2TW39	F2USF2	ARHA protein.	Small GTP binding protein RAB8; Belongs to the complex I LYR family.	0.516
PTSG_00306	PTSG_11696	F2TW39	F2U172	ARHA protein.	Uncharacterized protein.	0.612
PTSG_00306	PTSG_11774	F2TW39	F2TYR2	ARHA protein.	Uncharacterized protein.	0.452
PTSG_00766	PTSG_00815	F2TXE7	F2TXK0	GTP-binding protein yptV3.	Rab2a protein.	0.425
PTSG_00766	PTSG_01366	F2TXE7	F2U049	GTP-binding protein yptV3.	Tubulovesicle-associated protein.	0.465
PTSG_00766	PTSG_01405	F2TXE7	F2U091	GTP-binding protein yptV3.	Uncharacterized protein.	0.472

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