(95 nodes) Zinc finger, RING-type network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_02012	Uncharacterized protein. (500 aa)
	PTSG_01964	RING-type domain-containing protein. (663 aa)
	PTSG_01960	RING-type domain-containing protein. (525 aa)
	PTSG_01935	RING-type domain-containing protein. (615 aa)
	PTSG_01834	Uncharacterized protein. (974 aa)
	PTSG_01060	RING-type domain-containing protein. (799 aa)
	PTSG_01034	RING-type domain-containing protein. (465 aa)
	PTSG_01005	Uncharacterized protein. (613 aa)
	PTSG_00854	RING-type domain-containing protein. (1090 aa)
	PTSG_00799	RING-type domain-containing protein. (621 aa)
	PTSG_00796	RING-type domain-containing protein. (232 aa)
	PTSG_00772	Uncharacterized protein. (840 aa)
	PTSG_11546	Uncharacterized protein. (4928 aa)
	PTSG_00111	Uncharacterized protein. (260 aa)
	PTSG_11540	Uncharacterized protein. (966 aa)
	PTSG_00045	Uncharacterized protein. (1978 aa)
	PTSG_12744	Uncharacterized protein. (1679 aa)
	PTSG_00026	RING-type domain-containing protein. (243 aa)
	PTSG_11515	RING-type domain-containing protein. (176 aa)
	PTSG_09506	Uncharacterized protein. (553 aa)
	PTSG_09518	RING-type domain-containing protein. (233 aa)
	PTSG_09553	Uncharacterized protein. (479 aa)
	PTSG_09665	Uncharacterized protein. (402 aa)
	PTSG_08934	RING-type domain-containing protein. (5737 aa)
	PTSG_12821	Serine/threonine protein kinase. (6600 aa)
	PTSG_09361	RING-type domain-containing protein. (341 aa)
	PTSG_09210	RING-type domain-containing protein. (569 aa)
	PTSG_09837	RING-type domain-containing protein. (989 aa)
	PTSG_12936	Uncharacterized protein. (887 aa)
	PTSG_09976	RING-type domain-containing protein. (500 aa)
	PTSG_09759	RING-type domain-containing protein. (1795 aa)
	PTSG_10004	STE/STE11/MEKK2 protein kinase. (1617 aa)
	PTSG_10032	Uncharacterized protein. (660 aa)
	PTSG_08406	RING-type domain-containing protein. (5275 aa)
	PTSG_08310	E3 ubiquitin protein ligase. (640 aa)
	PTSG_07434	Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family. (990 aa)
	PTSG_08256	Uncharacterized protein. (432 aa)
	PTSG_08020	RING-type domain-containing protein. (5042 aa)
	PTSG_12627	Uncharacterized protein. (465 aa)
	PTSG_07858	RING-type domain-containing protein. (984 aa)
	PTSG_06697	RING-type domain-containing protein. (5949 aa)
	PTSG_06589	RING-CH-type domain-containing protein. (722 aa)
	PTSG_06892	Uncharacterized protein. (817 aa)
	PTSG_06779	RING-type domain-containing protein. (1175 aa)
	PTSG_06743	Uncharacterized protein. (984 aa)
	PTSG_05960	RING-type domain-containing protein. (570 aa)
	PTSG_05832	RING-type domain-containing protein. (250 aa)
	PTSG_05831	RING-type domain-containing protein. (147 aa)
	PTSG_05822	RING-type domain-containing protein. (636 aa)
	PTSG_12441	Uncharacterized protein. (786 aa)
	PTSG_12430	RING-type domain-containing protein. (1116 aa)
	PTSG_06242	Uncharacterized protein. (1692 aa)
	PTSG_05550	RING-type domain-containing protein. (534 aa)
	PTSG_05510	RING-type domain-containing protein. (879 aa)
	PTSG_05741	RBR-type E3 ubiquitin transferase. (531 aa)
	PTSG_05166	RING-type domain-containing protein. (561 aa)
	PTSG_05352	Uncharacterized protein. (543 aa)
	PTSG_04822	Nucleotide excision repair protein. (865 aa)
	PTSG_04803	Uncharacterized protein. (1649 aa)
	PTSG_04800	Ring-box protein 1. (125 aa)
	PTSG_04947	RING-type domain-containing protein. (634 aa)
	PTSG_04912	RING-type domain-containing protein. (1083 aa)
	PTSG_04411	RING-type domain-containing protein. (107 aa)
	PTSG_04331	Uncharacterized protein. (824 aa)
	PTSG_04311	RING-type domain-containing protein. (1632 aa)
	PTSG_12109	RBR-type E3 ubiquitin transferase. (470 aa)
	PTSG_03976	RING-type domain-containing protein. (630 aa)
	PTSG_03975	RING-type domain-containing protein. (806 aa)
	PTSG_03965	Uncharacterized protein. (377 aa)
	PTSG_12154	RING-type domain-containing protein. (585 aa)
	PTSG_04258	Uncharacterized protein. (768 aa)
	PTSG_04192	RING-type domain-containing protein. (355 aa)
	PTSG_04077	Uncharacterized protein. (1562 aa)
	PTSG_03578	Uncharacterized protein. (2008 aa)
	PTSG_12089	RING-type domain-containing protein. (772 aa)
	PTSG_03813	Uncharacterized protein. (504 aa)
	PTSG_03768	Ring finger protein 1. (348 aa)
	PTSG_11982	RING-type domain-containing protein. (267 aa)
	PTSG_03239	Uncharacterized protein. (1179 aa)
	PTSG_03094	Uncharacterized protein. (495 aa)
	PTSG_03085	Uncharacterized protein. (1293 aa)
	PTSG_11938	Anaphase-promoting complex subunit 11. (82 aa)
	PTSG_02811	RING-type domain-containing protein. (262 aa)
	PTSG_02736	RING-type domain-containing protein. (249 aa)
	PTSG_02658	RING finger domain-containing protein containing protein. (355 aa)
	PTSG_02092	Highwire. (4215 aa)
	PTSG_02541	WD_REPEATS_REGION domain-containing protein. (693 aa)
	PTSG_02458	Uncharacterized protein. (606 aa)
	PTSG_02184	RING-type domain-containing protein. (539 aa)
	PTSG_02149	RING-type domain-containing protein. (259 aa)
	PTSG_01239	Uncharacterized protein. (1902 aa)
	PTSG_01181	RING-type domain-containing protein. (1105 aa)
	PTSG_01176	RING-type domain-containing protein. (212 aa)
	PTSG_01157	RING-type domain-containing protein. (217 aa)
	PTSG_01380	RING-type domain-containing protein. (341 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00045	PTSG_04411	F2TVD3	F2U8H4	Uncharacterized protein.	RING-type domain-containing protein.	0.684
PTSG_00772	PTSG_01034	F2TXF4	F2TY73	Uncharacterized protein.	RING-type domain-containing protein.	0.580
PTSG_00772	PTSG_01834	F2TXF4	F2TZ32	Uncharacterized protein.	Uncharacterized protein.	0.580
PTSG_00772	PTSG_03094	F2TXF4	F2U481	Uncharacterized protein.	Uncharacterized protein.	0.638
PTSG_00772	PTSG_04411	F2TXF4	F2U8H4	Uncharacterized protein.	RING-type domain-containing protein.	0.457
PTSG_00799	PTSG_12936	F2TXI4	F2UNB6	RING-type domain-containing protein.	Uncharacterized protein.	0.437
PTSG_01005	PTSG_04800	F2TY44	F2U9Q9	Uncharacterized protein.	Ring-box protein 1.	0.770
PTSG_01005	PTSG_05550	F2TY44	F2UBI9	Uncharacterized protein.	RING-type domain-containing protein.	0.448
PTSG_01005	PTSG_06697	F2TY44	F2UFR5	Uncharacterized protein.	RING-type domain-containing protein.	0.448
PTSG_01005	PTSG_10004	F2TY44	F2UP85	Uncharacterized protein.	STE/STE11/MEKK2 protein kinase.	0.481
PTSG_01034	PTSG_00772	F2TY73	F2TXF4	RING-type domain-containing protein.	Uncharacterized protein.	0.580
PTSG_01034	PTSG_06892	F2TY73	F2UF38	RING-type domain-containing protein.	Uncharacterized protein.	0.548
PTSG_01181	PTSG_04800	F2U116	F2U9Q9	RING-type domain-containing protein.	Ring-box protein 1.	0.767
PTSG_01181	PTSG_12109	F2U116	F2U7G6	RING-type domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.404
PTSG_01380	PTSG_04800	F2U064	F2U9Q9	RING-type domain-containing protein.	Ring-box protein 1.	0.454
PTSG_01834	PTSG_00772	F2TZ32	F2TXF4	Uncharacterized protein.	Uncharacterized protein.	0.580
PTSG_01834	PTSG_06892	F2TZ32	F2UF38	Uncharacterized protein.	Uncharacterized protein.	0.548
PTSG_01964	PTSG_04311	F2TZG9	F2U867	RING-type domain-containing protein.	RING-type domain-containing protein.	0.450
PTSG_02149	PTSG_04800	F2U1C6	F2U9Q9	RING-type domain-containing protein.	Ring-box protein 1.	0.747
PTSG_02184	PTSG_09518	F2U1G4	F2UL85	RING-type domain-containing protein.	RING-type domain-containing protein.	0.473

page 1 of 5

Server load: low (10%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About