(8 nodes) SNARE network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_07526	SynN domain-containing protein. (216 aa)
	PTSG_10787	t-SNARE coiled-coil homology domain-containing protein. (220 aa)
	PTSG_07505	t-SNARE coiled-coil homology domain-containing protein. (173 aa)
	PTSG_05416	t-SNARE coiled-coil homology domain-containing protein. (214 aa)
	PTSG_00192	t-SNARE coiled-coil homology domain-containing protein. (217 aa)
	PTSG_00414	t-SNARE coiled-coil homology domain-containing protein. (247 aa)
	PTSG_03305	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (301 aa)
	PTSG_03656	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (345 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00192	PTSG_00414	F2TVS4	F2TWE8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.999
PTSG_00192	PTSG_03305	F2TVS4	F2U4T1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.995
PTSG_00192	PTSG_03656	F2TVS4	F2U679	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.997
PTSG_00192	PTSG_05416	F2TVS4	F2UAD4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.909
PTSG_00192	PTSG_07526	F2TVS4	F2UH08	t-SNARE coiled-coil homology domain-containing protein.	SynN domain-containing protein.	0.512
PTSG_00414	PTSG_00192	F2TWE8	F2TVS4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.999
PTSG_00414	PTSG_03305	F2TWE8	F2U4T1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.990
PTSG_00414	PTSG_03656	F2TWE8	F2U679	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.980
PTSG_00414	PTSG_05416	F2TWE8	F2UAD4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.856
PTSG_00414	PTSG_07505	F2TWE8	F2UIX3	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.577
PTSG_00414	PTSG_07526	F2TWE8	F2UH08	t-SNARE coiled-coil homology domain-containing protein.	SynN domain-containing protein.	0.714
PTSG_03305	PTSG_00192	F2U4T1	F2TVS4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.995
PTSG_03305	PTSG_00414	F2U4T1	F2TWE8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.990
PTSG_03305	PTSG_03656	F2U4T1	F2U679	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.630
PTSG_03305	PTSG_05416	F2U4T1	F2UAD4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.897
PTSG_03305	PTSG_07505	F2U4T1	F2UIX3	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.794
PTSG_03305	PTSG_07526	F2U4T1	F2UH08	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	SynN domain-containing protein.	0.873
PTSG_03656	PTSG_00192	F2U679	F2TVS4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.997
PTSG_03656	PTSG_00414	F2U679	F2TWE8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.980
PTSG_03656	PTSG_03305	F2U679	F2U4T1	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.630

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