STRINGSTRING
PTSG_06511 PTSG_06511 PTSG_08753 PTSG_08753 PTSG_09483 PTSG_09483 PTSG_09110 PTSG_09110 PTSG_10212 PTSG_10212 PTSG_10221 PTSG_10221 PTSG_10973 PTSG_10973 PTSG_11183 PTSG_11183 PTSG_11427 PTSG_11427 PTSG_08336 PTSG_08336 PTSG_01983 PTSG_01983 PTSG_02368 PTSG_02368 PTSG_02431 PTSG_02431 PTSG_03408 PTSG_03408 PTSG_03775 PTSG_03775 PTSG_03875 PTSG_03875 PTSG_05952 PTSG_05952 PTSG_12511 PTSG_12511
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_06511AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (147 aa)
PTSG_08753Uncharacterized protein. (140 aa)
PTSG_09483Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (508 aa)
PTSG_09110Uncharacterized protein. (457 aa)
PTSG_10212Clathrin associated protein AP47; Belongs to the adaptor complexes medium subunit family. (408 aa)
PTSG_10221AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (177 aa)
PTSG_10973Uncharacterized protein. (154 aa)
PTSG_11183Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (171 aa)
PTSG_11427Clat_adaptor_s domain-containing protein. (196 aa)
PTSG_08336Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (176 aa)
PTSG_01983MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (440 aa)
PTSG_02368SRP54 domain-containing protein. (668 aa)
PTSG_02431AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (158 aa)
PTSG_03408AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
PTSG_03775MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (416 aa)
PTSG_03875Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
PTSG_05952Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (172 aa)
PTSG_12511Uncharacterized protein; Belongs to the synaptobrevin family. (241 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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