(84 nodes) Helicase superfamily 1/2, ATP-binding domain network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00624	ATP-dependent RNA helicase RhlE. (2578 aa)
	PTSG_06744	Rad54b protein. (1070 aa)
	PTSG_07250	Uncharacterized protein; Belongs to the DEAD box helicase family. (751 aa)
	PTSG_07244	Uncharacterized protein. (2864 aa)
	PTSG_07169	DEAD box polypeptide 47 isoform 1; Belongs to the DEAD box helicase family. (711 aa)
	PTSG_07121	Uncharacterized protein. (808 aa)
	PTSG_06020	Uncharacterized protein. (1156 aa)
	PTSG_05966	DEAH box polypeptide 34. (1912 aa)
	PTSG_12442	Uncharacterized protein. (1313 aa)
	PTSG_12430	RING-type domain-containing protein. (1116 aa)
	PTSG_06304	ATP-dependent DEAD/H RNA helicase. (1363 aa)
	PTSG_02809	Uncharacterized protein. (1571 aa)
	PTSG_02848	DEAH box polypeptide 8. (1288 aa)
	PTSG_03178	Uncharacterized protein. (804 aa)
	PTSG_03196	RNA helicase. (857 aa)
	PTSG_03334	Uncharacterized protein. (884 aa)
	PTSG_03652	Uncharacterized protein. (837 aa)
	PTSG_04077	Uncharacterized protein. (1562 aa)
	PTSG_04124	Uncharacterized protein. (632 aa)
	PTSG_03916	Dhx33 protein. (709 aa)
	PTSG_12193	Uncharacterized protein. (2049 aa)
	PTSG_04398	Uncharacterized protein. (1275 aa)
	PTSG_04803	Uncharacterized protein. (1649 aa)
	PTSG_04822	Nucleotide excision repair protein. (865 aa)
	PTSG_05311	SNF2 family DNA-dependent ATPase. (2192 aa)
	PTSG_12303	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (903 aa)
	PTSG_06173	Uncharacterized protein. (1404 aa)
	PTSG_11491	DEAD-box ATP-dependent RNA helicase 26; Belongs to the DEAD box helicase family. (648 aa)
	PTSG_11191	ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (553 aa)
	PTSG_10952	ASCC3L1 protein. (2150 aa)
	PTSG_10267	BRG1 protein. (1726 aa)
	PTSG_10689	Uncharacterized protein. (1641 aa)
	PTSG_09886	RNA helicase. (649 aa)
	PTSG_09283	Uncharacterized protein; Belongs to the DEAD box helicase family. (448 aa)
	PTSG_12845	Uncharacterized protein. (984 aa)
	PTSG_12843	DEAD/DEAH box helicase. (595 aa)
	PTSG_09392	NXN protein. (4332 aa)
	PTSG_09027	Uncharacterized protein. (1264 aa)
	PTSG_08940	Uncharacterized protein. (478 aa)
	PTSG_08869	ATP-dependent RNA helicase. (637 aa)
	PTSG_08854	Uncharacterized protein. (1022 aa)
	PTSG_07488	CHD1 protein. (1497 aa)
	PTSG_07479	RecQ5. (1451 aa)
	PTSG_08233	Uncharacterized protein; Belongs to the DEAD box helicase family. (777 aa)
	PTSG_08218	BTAF1 protein. (1863 aa)
	PTSG_08092	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (404 aa)
	PTSG_08079	SNF2 family DNA-dependent ATPase. (1797 aa)
	PTSG_07865	eIF-4a; Belongs to the DEAD box helicase family. (409 aa)
	PTSG_07852	Uncharacterized protein. (1379 aa)
	PTSG_06559	Poly(A)-binding protein. (1688 aa)
	PTSG_06661	Snf family helicase. (3098 aa)
	PTSG_06987	eIF4a. (654 aa)
	PTSG_06940	DEAD/H box polypeptide 3; Belongs to the DEAD box helicase family. (710 aa)
	PTSG_00021	Uncharacterized protein. (554 aa)
	PTSG_00045	Uncharacterized protein. (1978 aa)
	PTSG_00085	DEAD box polypeptide 39 isoform 1. (438 aa)
	PTSG_00124	RNA helicase. (522 aa)
	PTSG_11548	Uncharacterized protein. (930 aa)
	PTSG_00174	Uncharacterized protein; Belongs to the DEAD box helicase family. (321 aa)
	PTSG_00236	DEAD box ATP-dependent RNA helicase. (1054 aa)
	PTSG_00412	DEAH box polypeptide 38. (1326 aa)
	PTSG_00418	Chromodomain helicase DNA binding protein 1. (1534 aa)
	PTSG_00442	Transcription activator. (1106 aa)
	PTSG_00554	Uncharacterized protein; Belongs to the DEAD box helicase family. (642 aa)
	PTSG_00568	ATP-dependent RNA helicase eIF4A. (547 aa)
	PTSG_00601	DEAD box polypeptide 41. (619 aa)
	PTSG_06886	ATP-dependent helicase. (1043 aa)
	PTSG_00671	Vasa. (873 aa)
	PTSG_00791	DEAD/DEAH box helicase. (605 aa)
	PTSG_00863	DEAD box polypeptide 17 isoform 2; Belongs to the DEAD box helicase family. (629 aa)
	PTSG_00993	Helicase ATP-binding domain-containing protein. (871 aa)
	PTSG_01031	Uncharacterized protein. (752 aa)
	PTSG_01598	Uncharacterized protein. (1255 aa)
	PTSG_01640	eIF4AIII-PA; Belongs to the DEAD box helicase family. (366 aa)
	PTSG_01679	Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. (473 aa)
	PTSG_01759	RNA helicase. (2166 aa)
	PTSG_01945	RNA helicase. (845 aa)
	PTSG_01994	Helicase DNA-binding protein. (1742 aa)
	PTSG_01262	Acyl-CoA dehydrogenase domain-containing protein. (832 aa)
	PTSG_01310	Serine/threonine protein kinase. (4337 aa)
	PTSG_11725	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (818 aa)
	PTSG_01570	Uncharacterized protein. (1332 aa)
	PTSG_02304	Uncharacterized protein. (2091 aa)
	PTSG_02517	DEAD/DEAH box helicase. (1034 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00021	PTSG_00085	F2TVA9	F2TVH0	Uncharacterized protein.	DEAD box polypeptide 39 isoform 1.	0.559
PTSG_00021	PTSG_00124	F2TVA9	F2TVL2	Uncharacterized protein.	RNA helicase.	0.656
PTSG_00021	PTSG_00174	F2TVA9	F2TVQ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.466
PTSG_00021	PTSG_00412	F2TVA9	F2TWE6	Uncharacterized protein.	DEAH box polypeptide 38.	0.528
PTSG_00021	PTSG_00601	F2TVA9	F2TWY2	Uncharacterized protein.	DEAD box polypeptide 41.	0.492
PTSG_00021	PTSG_00791	F2TVA9	F2TXH5	Uncharacterized protein.	DEAD/DEAH box helicase.	0.484
PTSG_00021	PTSG_01640	F2TVA9	F2TYI7	Uncharacterized protein.	eIF4AIII-PA; Belongs to the DEAD box helicase family.	0.656
PTSG_00021	PTSG_01945	F2TVA9	F2TZE8	Uncharacterized protein.	RNA helicase.	0.531
PTSG_00021	PTSG_02517	F2TVA9	F2U2F3	Uncharacterized protein.	DEAD/DEAH box helicase.	0.668
PTSG_00021	PTSG_02848	F2TVA9	F2U3I0	Uncharacterized protein.	DEAH box polypeptide 8.	0.484
PTSG_00021	PTSG_03196	F2TVA9	F2U4H8	Uncharacterized protein.	RNA helicase.	0.557
PTSG_00021	PTSG_03916	F2TVA9	F2U790	Uncharacterized protein.	Dhx33 protein.	0.484
PTSG_00021	PTSG_04124	F2TVA9	F2U6N3	Uncharacterized protein.	Uncharacterized protein.	0.543
PTSG_00021	PTSG_04398	F2TVA9	F2U8F9	Uncharacterized protein.	Uncharacterized protein.	0.484
PTSG_00021	PTSG_06886	F2TVA9	F2UF32	Uncharacterized protein.	ATP-dependent helicase.	0.565
PTSG_00021	PTSG_06940	F2TVA9	F2UF88	Uncharacterized protein.	DEAD/H box polypeptide 3; Belongs to the DEAD box helicase family.	0.601
PTSG_00021	PTSG_08940	F2TVA9	F2ULR2	Uncharacterized protein.	Uncharacterized protein.	0.776
PTSG_00021	PTSG_09283	F2TVA9	F2UN92	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.582
PTSG_00021	PTSG_09886	F2TVA9	F2UNF0	Uncharacterized protein.	RNA helicase.	0.486
PTSG_00021	PTSG_11491	F2TVA9	F2UTM1	Uncharacterized protein.	DEAD-box ATP-dependent RNA helicase 26; Belongs to the DEAD box helicase family.	0.492

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