(27 nodes) Zinc finger, FYVE-related network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00886	Uncharacterized protein. (1612 aa)
	PTSG_01310	Serine/threonine protein kinase. (4337 aa)
	PTSG_02540	FYVE-type domain-containing protein. (475 aa)
	PTSG_11835	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1016 aa)
	PTSG_03082	Uncharacterized protein. (356 aa)
	PTSG_03085	Uncharacterized protein. (1293 aa)
	PTSG_03255	Uncharacterized protein. (1180 aa)
	PTSG_08256	Uncharacterized protein. (432 aa)
	PTSG_08057	FYVE-type domain-containing protein. (572 aa)
	PTSG_12077	Uncharacterized protein. (780 aa)
	PTSG_04303	FYVE-type domain-containing protein. (665 aa)
	PTSG_12655	Uncharacterized protein. (2898 aa)
	PTSG_07194	Uncharacterized protein. (624 aa)
	PTSG_05525	TK protein kinase. (612 aa)
	PTSG_11174	Uncharacterized protein. (1021 aa)
	PTSG_11447	Uncharacterized protein. (551 aa)
	PTSG_13141	Uncharacterized protein. (846 aa)
	PTSG_10603	Uncharacterized protein. (491 aa)
	PTSG_10376	Uncharacterized protein. (869 aa)
	PTSG_10328	WDFY3 protein. (4426 aa)
	PTSG_10018	Uncharacterized protein. (1368 aa)
	PTSG_09603	Uncharacterized protein. (278 aa)
	PTSG_07413	Uncharacterized protein. (481 aa)
	PTSG_07395	Leucine-rich repeat containing protein. (2302 aa)
	PTSG_00206	Uncharacterized protein. (340 aa)
	PTSG_00443	Uncharacterized protein. (597 aa)
	PTSG_00572	Uncharacterized protein. (437 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00443	PTSG_02540	F2TWH8	F2U2H4	Uncharacterized protein.	FYVE-type domain-containing protein.	0.900
PTSG_00443	PTSG_11174	F2TWH8	F2USM7	Uncharacterized protein.	Uncharacterized protein.	0.529
PTSG_00572	PTSG_11174	F2TWV2	F2USM7	Uncharacterized protein.	Uncharacterized protein.	0.529
PTSG_00886	PTSG_03085	F2TXS1	F2U473	Uncharacterized protein.	Uncharacterized protein.	0.900
PTSG_02540	PTSG_00443	F2U2H4	F2TWH8	FYVE-type domain-containing protein.	Uncharacterized protein.	0.900
PTSG_02540	PTSG_11174	F2U2H4	F2USM7	FYVE-type domain-containing protein.	Uncharacterized protein.	0.529
PTSG_03085	PTSG_00886	F2U473	F2TXS1	Uncharacterized protein.	Uncharacterized protein.	0.900
PTSG_07413	PTSG_11174	F2UIM4	F2USM7	Uncharacterized protein.	Uncharacterized protein.	0.441
PTSG_08057	PTSG_13141	F2UHV7	F2US64	FYVE-type domain-containing protein.	Uncharacterized protein.	0.459
PTSG_11174	PTSG_00443	F2USM7	F2TWH8	Uncharacterized protein.	Uncharacterized protein.	0.529
PTSG_11174	PTSG_00572	F2USM7	F2TWV2	Uncharacterized protein.	Uncharacterized protein.	0.529
PTSG_11174	PTSG_02540	F2USM7	F2U2H4	Uncharacterized protein.	FYVE-type domain-containing protein.	0.529
PTSG_11174	PTSG_07413	F2USM7	F2UIM4	Uncharacterized protein.	Uncharacterized protein.	0.441
PTSG_11835	PTSG_12655	F2U2K7	F2UGR5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.592
PTSG_12077	PTSG_12655	F2U6I0	F2UGR5	Uncharacterized protein.	Uncharacterized protein.	0.482
PTSG_12655	PTSG_11835	F2UGR5	F2U2K7	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.592
PTSG_12655	PTSG_12077	F2UGR5	F2U6I0	Uncharacterized protein.	Uncharacterized protein.	0.482
PTSG_13141	PTSG_08057	F2US64	F2UHV7	Uncharacterized protein.	FYVE-type domain-containing protein.	0.459

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