(114 nodes) Winged helix-like DNA-binding domain superfamily network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_08896	HTH La-type RNA-binding domain-containing protein. (593 aa)
	PTSG_00237	40S ribosomal protein S19. (147 aa)
	PTSG_00258	RFX-type winged-helix domain-containing protein. (1207 aa)
	PTSG_00302	Fork-head domain-containing protein. (481 aa)
	PTSG_00377	DEP domain-containing protein. (875 aa)
	PTSG_11612	Roc domain-containing protein. (1979 aa)
	PTSG_00676	Roc domain-containing protein. (1424 aa)
	PTSG_00815	Rab2a protein. (1630 aa)
	PTSG_00908	Fork-head domain-containing protein. (693 aa)
	PTSG_00936	Fork-head domain-containing protein. (474 aa)
	PTSG_11665	Uncharacterized protein. (320 aa)
	PTSG_01032	RFX-type winged-helix domain-containing protein. (1038 aa)
	PTSG_01054	HTH La-type RNA-binding domain-containing protein. (765 aa)
	PTSG_01693	E2F_TDP domain-containing protein. (364 aa)
	PTSG_01754	GTP-binding protein. (1337 aa)
	PTSG_01759	RNA helicase. (2166 aa)
	PTSG_11700	Uncharacterized protein. (1594 aa)
	PTSG_01304	TP6A_N domain-containing protein. (435 aa)
	PTSG_01441	H15 domain-containing protein. (141 aa)
	PTSG_11740	Uncharacterized protein; Belongs to the cullin family. (727 aa)
	PTSG_01490	RPA_C domain-containing protein. (294 aa)
	PTSG_01131	Mercuric reductase. (663 aa)
	PTSG_02160	Uncharacterized protein. (580 aa)
	PTSG_02309	PCI domain-containing protein. (404 aa)
	PTSG_02316	Forkhead box J3. (958 aa)
	PTSG_02366	Fork-head domain-containing protein. (771 aa)
	PTSG_02414	Uncharacterized protein. (813 aa)
	PTSG_02438	Uncharacterized protein. (301 aa)
	PTSG_02100	Proteasome 26S non-ATPase subunit 3. (487 aa)
	PTSG_02615	Uncharacterized protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (245 aa)
	PTSG_11903	Roc domain-containing protein. (1728 aa)
	PTSG_02681	COR domain-containing protein. (1593 aa)
	PTSG_02981	Uncharacterized protein. (1435 aa)
	PTSG_03049	HTH_9 domain-containing protein. (327 aa)
	PTSG_11973	HSF_DOMAIN domain-containing protein. (579 aa)
	PTSG_03350	Uncharacterized protein. (1361 aa)
	PTSG_03407	Uncharacterized protein. (866 aa)
	PTSG_03537	DEP domain-containing protein. (909 aa)
	PTSG_03601	Heat shock transcription factor. (455 aa)
	PTSG_12063	RFX-type winged-helix domain-containing protein. (942 aa)
	PTSG_12139	Uncharacterized protein. (1446 aa)
	PTSG_03996	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (460 aa)
	PTSG_04611	Rho-GAP domain-containing protein. (876 aa)
	PTSG_04684	Atypical/RIO/RIO2 protein kinase. (590 aa)
	PTSG_04332	CULLIN_2 domain-containing protein; Belongs to the cullin family. (770 aa)
	PTSG_04341	GTPase. (1557 aa)
	PTSG_04940	Hydroxyneurosporene-O-methyltransferase. (487 aa)
	PTSG_04945	Serine/threonine protein kinase. (2684 aa)
	PTSG_05069	Uncharacterized protein. (334 aa)
	PTSG_04713	Methylated-DNA/protein-cysteinemethyltransferase. (176 aa)
	PTSG_12317	Uncharacterized protein. (1425 aa)
	PTSG_05749	AAA domain-containing protein. (785 aa)
	PTSG_12359	Uncharacterized protein. (1352 aa)
	PTSG_05637	Peptidase_M24 domain-containing protein. (372 aa)
	PTSG_05682	Uncharacterized protein. (1296 aa)
	PTSG_06310	DEP domain-containing protein. (274 aa)
	PTSG_06014	Uncharacterized protein. (365 aa)
	PTSG_06050	Uncharacterized protein. (1088 aa)
	PTSG_06769	Uncharacterized protein. (222 aa)
	PTSG_06836	Fork-head domain-containing protein. (604 aa)
	PTSG_06903	E2F_TDP domain-containing protein. (701 aa)
	PTSG_06665	Proliferation-associated protein 2G4. (369 aa)
	PTSG_06503	Glutathione peroxidase. (435 aa)
	PTSG_06555	DEP domain-containing protein. (284 aa)
	PTSG_06576	Uncharacterized protein. (251 aa)
	PTSG_12633	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1213 aa)
	PTSG_07786	TKL/MLK/TAK1 protein kinase. (746 aa)
	PTSG_07792	HTH La-type RNA-binding domain-containing protein. (1114 aa)
	PTSG_07852	Uncharacterized protein. (1379 aa)
	PTSG_12655	Uncharacterized protein. (2898 aa)
	PTSG_07957	E2F_TDP domain-containing protein. (327 aa)
	PTSG_08019	HTH La-type RNA-binding domain-containing protein. (918 aa)
	PTSG_08035	CULLIN_2 domain-containing protein; Belongs to the cullin family. (850 aa)
	PTSG_08038	26S proteasome non-ATPase regulatory subunit 12. (443 aa)
	PTSG_07479	RecQ5. (1451 aa)
	PTSG_08444	Uncharacterized protein. (303 aa)
	PTSG_08524	Uncharacterized protein. (1420 aa)
	PTSG_08536	S10e ribosomal protein. (160 aa)
	PTSG_08541	Uncharacterized protein. (761 aa)
	PTSG_08722	ANK_REP_REGION domain-containing protein. (1426 aa)
	PTSG_08757	Uncharacterized protein. (1284 aa)
	PTSG_09501	CULLIN_2 domain-containing protein; Belongs to the cullin family. (743 aa)
	PTSG_09620	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (362 aa)
	PTSG_08933	Uncharacterized protein. (1420 aa)
	PTSG_12865	Uncharacterized protein. (1444 aa)
	PTSG_09165	Roc domain-containing protein. (1276 aa)
	PTSG_09872	Uncharacterized protein. (462 aa)
	PTSG_12965	Uncharacterized protein. (437 aa)
	PTSG_09983	Uncharacterized protein. (359 aa)
	PTSG_09991	COR domain-containing protein. (900 aa)
	PTSG_10033	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (383 aa)
	PTSG_10069	Uncharacterized protein. (816 aa)
	PTSG_10437	Uncharacterized protein. (1345 aa)
	PTSG_10478	Uncharacterized protein. (1257 aa)
	PTSG_10744	Winged helix protein CWH-5. (1159 aa)
	PTSG_10749	GLUE N-terminal domain-containing protein. (440 aa)
	PTSG_10225	RFX-type winged-helix domain-containing protein. (738 aa)
	PTSG_10315	Uncharacterized protein. (1406 aa)
	PTSG_13103	Uncharacterized protein. (1445 aa)
	PTSG_10524	Uncharacterized protein. (1384 aa)
	PTSG_13066	COR domain-containing protein. (968 aa)
	PTSG_10563	KIF5C protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1667 aa)
	PTSG_10572	Uncharacterized protein. (1857 aa)
	PTSG_10635	Transcription factor inhibitor ECI-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1619 aa)
	PTSG_11050	Uncharacterized protein. (1515 aa)
	PTSG_10952	ASCC3L1 protein. (2150 aa)
	PTSG_10954	Uncharacterized protein. (1437 aa)
	PTSG_11181	Pex14_N domain-containing protein. (304 aa)
	PTSG_11207	Uncharacterized protein. (1485 aa)
	PTSG_13152	Uncharacterized protein. (1473 aa)
	PTSG_13160	Uncharacterized protein. (1245 aa)
	PTSG_11382	Uncharacterized protein. (1301 aa)
	PTSG_11391	ANK_REP_REGION domain-containing protein. (475 aa)
	PTSG_11475	PCI domain-containing protein. (198 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00237	PTSG_04684	F2TVX0	F2U848	40S ribosomal protein S19.	Atypical/RIO/RIO2 protein kinase.	0.972
PTSG_00237	PTSG_05637	F2TVX0	F2UBS6	40S ribosomal protein S19.	Peptidase_M24 domain-containing protein.	0.717
PTSG_00237	PTSG_06665	F2TVX0	F2UFN0	40S ribosomal protein S19.	Proliferation-associated protein 2G4.	0.717
PTSG_00237	PTSG_08536	F2TVX0	F2UJZ0	40S ribosomal protein S19.	S10e ribosomal protein.	0.999
PTSG_00237	PTSG_10033	F2TVX0	F2UPB3	40S ribosomal protein S19.	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	0.519
PTSG_00237	PTSG_11475	F2TVX0	F2UTK3	40S ribosomal protein S19.	PCI domain-containing protein.	0.910
PTSG_00302	PTSG_02681	F2TW35	F2U300	Fork-head domain-containing protein.	COR domain-containing protein.	0.492
PTSG_00302	PTSG_09165	F2TW35	F2UMX1	Fork-head domain-containing protein.	Roc domain-containing protein.	0.492
PTSG_00302	PTSG_09620	F2TW35	F2ULI6	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.419
PTSG_00302	PTSG_10437	F2TW35	F2UPN6	Fork-head domain-containing protein.	Uncharacterized protein.	0.492
PTSG_00302	PTSG_11382	F2TW35	F2UT82	Fork-head domain-containing protein.	Uncharacterized protein.	0.492
PTSG_00815	PTSG_02681	F2TXK0	F2U300	Rab2a protein.	COR domain-containing protein.	0.716
PTSG_00815	PTSG_09165	F2TXK0	F2UMX1	Rab2a protein.	Roc domain-containing protein.	0.716
PTSG_00815	PTSG_10437	F2TXK0	F2UPN6	Rab2a protein.	Uncharacterized protein.	0.716
PTSG_00815	PTSG_11382	F2TXK0	F2UT82	Rab2a protein.	Uncharacterized protein.	0.716
PTSG_00908	PTSG_02681	F2TXU4	F2U300	Fork-head domain-containing protein.	COR domain-containing protein.	0.492
PTSG_00908	PTSG_09165	F2TXU4	F2UMX1	Fork-head domain-containing protein.	Roc domain-containing protein.	0.492
PTSG_00908	PTSG_10437	F2TXU4	F2UPN6	Fork-head domain-containing protein.	Uncharacterized protein.	0.492
PTSG_00908	PTSG_11382	F2TXU4	F2UT82	Fork-head domain-containing protein.	Uncharacterized protein.	0.492
PTSG_00936	PTSG_02681	F2TXX5	F2U300	Fork-head domain-containing protein.	COR domain-containing protein.	0.492

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