STRINGSTRING
PTSG_05155 PTSG_05155 PTSG_00415 PTSG_00415 PTSG_03714 PTSG_03714 PTSG_09663 PTSG_09663
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_05155Tyrosine--tRNA ligase. (459 aa)
PTSG_00415U3 small nucleolar ribonucleoprotein IMP3. (178 aa)
PTSG_0371440S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
PTSG_0966340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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