(31 nodes) CDC42 GTPase cycle network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_03106	Uncharacterized protein. (681 aa)
	PTSG_00409	Preoptic area regulatory factor 2. (579 aa)
	PTSG_01146	Uncharacterized protein. (1194 aa)
	PTSG_01630	Uncharacterized protein. (697 aa)
	PTSG_01699	Uncharacterized protein. (838 aa)
	PTSG_01268	Rho-GAP domain-containing protein. (1195 aa)
	PTSG_11734	Uncharacterized protein. (1065 aa)
	PTSG_01105	Uncharacterized protein; Belongs to the DOCK family. (1947 aa)
	PTSG_04167	Uncharacterized protein. (189 aa)
	PTSG_04008	K+ channel tetramerisation domain-containing protein. (756 aa)
	PTSG_04599	Uncharacterized protein. (950 aa)
	PTSG_12168	Uncharacterized protein. (1777 aa)
	PTSG_04500	DH domain-containing protein. (687 aa)
	PTSG_05229	PH domain-containing protein. (287 aa)
	PTSG_05488	Serine/threonine protein kinase. (1917 aa)
	PTSG_05616	WH2 domain-containing protein. (354 aa)
	PTSG_06171	Uncharacterized protein. (859 aa)
	PTSG_06036	Uncharacterized protein. (494 aa)
	PTSG_07027	CDC42 small effector protein 2. (152 aa)
	PTSG_06757	Uncharacterized protein. (354 aa)
	PTSG_09015	Uncharacterized protein. (1625 aa)
	PTSG_12878	Rho-GAP domain-containing protein. (781 aa)
	PTSG_09416	Uncharacterized protein. (1376 aa)
	PTSG_09690	Uncharacterized protein; Belongs to the DOCK family. (1898 aa)
	PTSG_09691	Uncharacterized protein. (1187 aa)
	PTSG_09803	Uncharacterized protein. (2254 aa)
	PTSG_10315	Uncharacterized protein. (1406 aa)
	PTSG_13068	Rho-GAP domain-containing protein. (893 aa)
	PTSG_04698	ADP-ribosylation factor GTPase activating protein 1. (1516 aa)
	PTSG_04711	WH2 domain-containing protein. (506 aa)
	PTSG_02735	Uncharacterized protein. (758 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00409	PTSG_06036	F2TWE2	F2UDH7	Preoptic area regulatory factor 2.	Uncharacterized protein.	0.547
PTSG_01630	PTSG_11734	F2TYH8	F2U0E1	Uncharacterized protein.	Uncharacterized protein.	0.887
PTSG_01699	PTSG_11734	F2TYP6	F2U0E1	Uncharacterized protein.	Uncharacterized protein.	0.887
PTSG_02735	PTSG_05488	F2U359	F2UBC9	Uncharacterized protein.	Serine/threonine protein kinase.	0.927
PTSG_04167	PTSG_09015	F2U6T0	F2ULY8	Uncharacterized protein.	Uncharacterized protein.	0.466
PTSG_04500	PTSG_11734	F2U8R2	F2U0E1	DH domain-containing protein.	Uncharacterized protein.	0.409
PTSG_04711	PTSG_12168	F2U9H5	F2U8H0	WH2 domain-containing protein.	Uncharacterized protein.	0.607
PTSG_05488	PTSG_02735	F2UBC9	F2U359	Serine/threonine protein kinase.	Uncharacterized protein.	0.927
PTSG_06036	PTSG_00409	F2UDH7	F2TWE2	Uncharacterized protein.	Preoptic area regulatory factor 2.	0.547
PTSG_06036	PTSG_09015	F2UDH7	F2ULY8	Uncharacterized protein.	Uncharacterized protein.	0.664
PTSG_06036	PTSG_12168	F2UDH7	F2U8H0	Uncharacterized protein.	Uncharacterized protein.	0.401
PTSG_09015	PTSG_04167	F2ULY8	F2U6T0	Uncharacterized protein.	Uncharacterized protein.	0.466
PTSG_09015	PTSG_06036	F2ULY8	F2UDH7	Uncharacterized protein.	Uncharacterized protein.	0.664
PTSG_09015	PTSG_12878	F2ULY8	F2UMF3	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.469
PTSG_11734	PTSG_01630	F2U0E1	F2TYH8	Uncharacterized protein.	Uncharacterized protein.	0.887
PTSG_11734	PTSG_01699	F2U0E1	F2TYP6	Uncharacterized protein.	Uncharacterized protein.	0.887
PTSG_11734	PTSG_04500	F2U0E1	F2U8R2	Uncharacterized protein.	DH domain-containing protein.	0.409
PTSG_12168	PTSG_04711	F2U8H0	F2U9H5	Uncharacterized protein.	WH2 domain-containing protein.	0.607
PTSG_12168	PTSG_06036	F2U8H0	F2UDH7	Uncharacterized protein.	Uncharacterized protein.	0.401
PTSG_12878	PTSG_09015	F2UMF3	F2ULY8	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.469

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