(38 nodes) Ion transport protein network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_11424	WD-40 repeat protein. (1885 aa)
	PTSG_11085	Uncharacterized protein. (1120 aa)
	PTSG_06633	WD-40 repeat protein. (1704 aa)
	PTSG_06842	Ion_trans domain-containing protein. (203 aa)
	PTSG_07128	Uncharacterized protein. (2613 aa)
	PTSG_06996	Inositol 1,4,5-trisphosphate receptor type 3. (2539 aa)
	PTSG_06082	Uncharacterized protein. (2399 aa)
	PTSG_06043	Uncharacterized protein. (1435 aa)
	PTSG_06401	Uncharacterized protein. (1604 aa)
	PTSG_06153	Ryanodine receptor type 1. (5340 aa)
	PTSG_05449	Nudt9 protein. (1494 aa)
	PTSG_05447	Nudix-type domain-containing protein 9 isoform b. (1520 aa)
	PTSG_05446	Nudix hydrolase domain-containing protein. (1310 aa)
	PTSG_04761	Ankyrin repeat domain-containing protein. (1154 aa)
	PTSG_04342	Uncharacterized protein. (565 aa)
	PTSG_04686	Uncharacterized protein. (798 aa)
	PTSG_03773	Voltage-dependent calcium channel T type alpha 1G subunit domain II. (2453 aa)
	PTSG_02729	ADP-ribose pyrophosphatase. (1442 aa)
	PTSG_02461	Uncharacterized protein. (2595 aa)
	PTSG_02433	WD-40 repeat protein. (1301 aa)
	PTSG_01562	Uncharacterized protein. (1200 aa)
	PTSG_01933	Uncharacterized protein. (2035 aa)
	PTSG_01632	Uncharacterized protein. (1562 aa)
	PTSG_00951	Uncharacterized protein. (2865 aa)
	PTSG_00807	Serine/Threonine protein kinase. (1514 aa)
	PTSG_07655	Type I inositol triphosphate receptor. (2612 aa)
	PTSG_07737	Hyperpolarization-activated ion channel protein. (849 aa)
	PTSG_12745	Uncharacterized protein. (1791 aa)
	PTSG_00336	Sodium channel alpha subunit. (1630 aa)
	PTSG_00203	Uncharacterized protein. (432 aa)
	PTSG_09605	EF-hand domain-containing protein. (1009 aa)
	PTSG_09464	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1446 aa)
	PTSG_10767	WD-repeat protein. (1092 aa)
	PTSG_10886	Uncharacterized protein. (1411 aa)
	PTSG_10899	WD_REPEATS_REGION domain-containing protein. (978 aa)
	PTSG_07515	Ion_trans domain-containing protein. (790 aa)
	PTSG_13126	Glrp1 protein. (1434 aa)
	PTSG_11274	Nudt9 protein. (1666 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00336	PTSG_03773	F2TW72	F2U5C1	Sodium channel alpha subunit.	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	0.537
PTSG_01562	PTSG_02729	F2U0Q2	F2U348	Uncharacterized protein.	ADP-ribose pyrophosphatase.	0.441
PTSG_01562	PTSG_05446	F2U0Q2	F2UB86	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.441
PTSG_01562	PTSG_05447	F2U0Q2	F2UB87	Uncharacterized protein.	Nudix-type domain-containing protein 9 isoform b.	0.441
PTSG_01562	PTSG_05449	F2U0Q2	F2UB89	Uncharacterized protein.	Nudt9 protein.	0.441
PTSG_01562	PTSG_10899	F2U0Q2	F2URB8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.482
PTSG_01562	PTSG_11274	F2U0Q2	F2USX8	Uncharacterized protein.	Nudt9 protein.	0.441
PTSG_02729	PTSG_01562	F2U348	F2U0Q2	ADP-ribose pyrophosphatase.	Uncharacterized protein.	0.441
PTSG_02729	PTSG_04761	F2U348	F2U9M1	ADP-ribose pyrophosphatase.	Ankyrin repeat domain-containing protein.	0.402
PTSG_02729	PTSG_07515	F2U348	F2UGZ3	ADP-ribose pyrophosphatase.	Ion_trans domain-containing protein.	0.402
PTSG_02729	PTSG_10886	F2U348	F2URA4	ADP-ribose pyrophosphatase.	Uncharacterized protein.	0.402
PTSG_02729	PTSG_10899	F2U348	F2URB8	ADP-ribose pyrophosphatase.	WD_REPEATS_REGION domain-containing protein.	0.548
PTSG_03773	PTSG_00336	F2U5C1	F2TW72	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	Sodium channel alpha subunit.	0.537
PTSG_03773	PTSG_04342	F2U5C1	F2U899	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	Uncharacterized protein.	0.482
PTSG_03773	PTSG_06153	F2U5C1	F2UC37	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	Ryanodine receptor type 1.	0.472
PTSG_03773	PTSG_09464	F2U5C1	F2UMP7	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.565
PTSG_03773	PTSG_11085	F2U5C1	F2US35	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	Uncharacterized protein.	0.482
PTSG_04342	PTSG_03773	F2U899	F2U5C1	Uncharacterized protein.	Voltage-dependent calcium channel T type alpha 1G subunit domain II.	0.482
PTSG_04761	PTSG_02729	F2U9M1	F2U348	Ankyrin repeat domain-containing protein.	ADP-ribose pyrophosphatase.	0.402
PTSG_04761	PTSG_05446	F2U9M1	F2UB86	Ankyrin repeat domain-containing protein.	Nudix hydrolase domain-containing protein.	0.402

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