(48 nodes) C-terminal of Roc, COR, domain network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_02981	Uncharacterized protein. (1435 aa)
	PTSG_11612	Roc domain-containing protein. (1979 aa)
	PTSG_00676	Roc domain-containing protein. (1424 aa)
	PTSG_00815	Rab2a protein. (1630 aa)
	PTSG_01754	GTP-binding protein. (1337 aa)
	PTSG_11700	Uncharacterized protein. (1594 aa)
	PTSG_11865	Uncharacterized protein. (1335 aa)
	PTSG_11903	Roc domain-containing protein. (1728 aa)
	PTSG_02681	COR domain-containing protein. (1593 aa)
	PTSG_03350	Uncharacterized protein. (1361 aa)
	PTSG_03500	Uncharacterized protein. (1513 aa)
	PTSG_12139	Uncharacterized protein. (1446 aa)
	PTSG_04341	GTPase. (1557 aa)
	PTSG_05418	Uncharacterized protein. (1690 aa)
	PTSG_12317	Uncharacterized protein. (1425 aa)
	PTSG_12359	Uncharacterized protein. (1352 aa)
	PTSG_05682	Uncharacterized protein. (1296 aa)
	PTSG_12661	TKL protein kinase. (1696 aa)
	PTSG_07514	Uncharacterized protein. (768 aa)
	PTSG_07288	COR domain-containing protein. (1102 aa)
	PTSG_12575	COR domain-containing protein. (1165 aa)
	PTSG_08520	Uncharacterized protein. (800 aa)
	PTSG_08524	Uncharacterized protein. (1420 aa)
	PTSG_08560	COR domain-containing protein. (686 aa)
	PTSG_08722	ANK_REP_REGION domain-containing protein. (1426 aa)
	PTSG_08728	Uncharacterized protein. (1101 aa)
	PTSG_08757	Uncharacterized protein. (1284 aa)
	PTSG_12898	COR domain-containing protein. (1415 aa)
	PTSG_08933	Uncharacterized protein. (1420 aa)
	PTSG_12865	Uncharacterized protein. (1444 aa)
	PTSG_09165	Roc domain-containing protein. (1276 aa)
	PTSG_09285	COR domain-containing protein. (1250 aa)
	PTSG_09991	COR domain-containing protein. (900 aa)
	PTSG_12997	ANK_REP_REGION domain-containing protein. (2282 aa)
	PTSG_13043	COR domain-containing protein. (1170 aa)
	PTSG_10437	Uncharacterized protein. (1345 aa)
	PTSG_10478	Uncharacterized protein. (1257 aa)
	PTSG_10661	Uncharacterized protein. (1538 aa)
	PTSG_10280	COR domain-containing protein. (1272 aa)
	PTSG_13103	Uncharacterized protein. (1445 aa)
	PTSG_10524	Uncharacterized protein. (1384 aa)
	PTSG_13066	COR domain-containing protein. (968 aa)
	PTSG_11050	Uncharacterized protein. (1515 aa)
	PTSG_13136	Uncharacterized protein. (1190 aa)
	PTSG_11207	Uncharacterized protein. (1485 aa)
	PTSG_13152	Uncharacterized protein. (1473 aa)
	PTSG_13160	Uncharacterized protein. (1245 aa)
	PTSG_11382	Uncharacterized protein. (1301 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00815	PTSG_02681	F2TXK0	F2U300	Rab2a protein.	COR domain-containing protein.	0.716
PTSG_00815	PTSG_09165	F2TXK0	F2UMX1	Rab2a protein.	Roc domain-containing protein.	0.716
PTSG_00815	PTSG_10437	F2TXK0	F2UPN6	Rab2a protein.	Uncharacterized protein.	0.716
PTSG_00815	PTSG_11382	F2TXK0	F2UT82	Rab2a protein.	Uncharacterized protein.	0.716
PTSG_01754	PTSG_02681	F2TYV3	F2U300	GTP-binding protein.	COR domain-containing protein.	0.504
PTSG_01754	PTSG_09165	F2TYV3	F2UMX1	GTP-binding protein.	Roc domain-containing protein.	0.504
PTSG_01754	PTSG_10437	F2TYV3	F2UPN6	GTP-binding protein.	Uncharacterized protein.	0.504
PTSG_01754	PTSG_11382	F2TYV3	F2UT82	GTP-binding protein.	Uncharacterized protein.	0.504
PTSG_02681	PTSG_00815	F2U300	F2TXK0	COR domain-containing protein.	Rab2a protein.	0.716
PTSG_02681	PTSG_01754	F2U300	F2TYV3	COR domain-containing protein.	GTP-binding protein.	0.504
PTSG_02681	PTSG_02981	F2U300	F2U3X0	COR domain-containing protein.	Uncharacterized protein.	0.415
PTSG_02681	PTSG_03350	F2U300	F2U4X3	COR domain-containing protein.	Uncharacterized protein.	0.415
PTSG_02681	PTSG_04341	F2U300	F2U898	COR domain-containing protein.	GTPase.	0.716
PTSG_02681	PTSG_08757	F2U300	F2UKL6	COR domain-containing protein.	Uncharacterized protein.	0.415
PTSG_02681	PTSG_09165	F2U300	F2UMX1	COR domain-containing protein.	Roc domain-containing protein.	0.999
PTSG_02681	PTSG_10437	F2U300	F2UPN6	COR domain-containing protein.	Uncharacterized protein.	0.999
PTSG_02681	PTSG_11382	F2U300	F2UT82	COR domain-containing protein.	Uncharacterized protein.	0.999
PTSG_02981	PTSG_02681	F2U3X0	F2U300	Uncharacterized protein.	COR domain-containing protein.	0.415
PTSG_02981	PTSG_09165	F2U3X0	F2UMX1	Uncharacterized protein.	Roc domain-containing protein.	0.415
PTSG_02981	PTSG_10437	F2U3X0	F2UPN6	Uncharacterized protein.	Uncharacterized protein.	0.415

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